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Cd200l1 Gene Detail
Summary
  • Symbol
    Cd200l1
  • Name
    CD200 molecule like 1
  • Synonyms
    Gm609, iSEC1, LOC208166, LOC385647
  • Feature Type
    protein coding gene
  • IDs
    MGI:2685455
    NCBI Gene: 208166
  • Alliance
    genome feature page
  • Transcription Start Sites
    4 TSS
Location &
Maps
more
  • Sequence Map
    Chr16:45232131-45313332 bp, - strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 16, 29.53 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    2117 from dbSNP Build 142
  • Strain Annotations
    19
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2685455
 protein coding gene Chr16:45232130-45313367 (-)
129S1/SvImJ ENSMUSG00200021174
 protein coding gene Chr16:42127579-42210564 (-)
A/J ENSMUSG00195003170
 protein coding gene Chr16:41735330-41813408 (-)
AKR/J ENSMUSG00220022060
 protein coding gene Chr16:42087437-42165436 (-)
BALB/cJ ENSMUSG00180026890
 protein coding gene Chr16:41940353-42018343 (-)
C3H/HeJ ENSMUSG00175025444
 protein coding gene Chr16:42194070-42277710 (-)
C57BL/6NJ ENSMUSG00215007016
 protein coding gene Chr16:42013917-42097575 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0020779
 protein coding gene Chr16:42615826-42670849 (-)
CAST/EiJ ENSTCUG00005012641
 protein coding gene Chr16:42421024-42494868 (-)
CBA/J ENSMUSG00210016421
 protein coding gene Chr16:42216686-42262357 (-)
DBA/2J ENSMUSG00185010094
 protein coding gene Chr16:42119952-42198012 (-)
FVB/NJ ENSMUSG00205010580
 protein coding gene Chr16:41986752-42064900 (-)
JF1/MsJ ENSUMUG00000027899
 protein coding gene Chr16:42329639-42413291 (-)
LP/J ENSMUSG00230027687
 protein coding gene Chr16:44681497-44764466 (-)
NOD/ShiLtJ ENSMUSG00190018202
 protein coding gene Chr16:42125638-42208609 (-)
NZO/HlLtJ ENSMUSG00225028399
 protein coding gene Chr16:47773176-47856148 (-)
PWK/PhJ ENSLUMG00010027659
 protein coding gene Chr16:42214625-42291352 (-)
SPRET/EiJ ENSMSPG00010007436
 protein coding gene Chr16:42375323-42417095 (-)
WSB/EiJ ENSIUOG00005013257
 protein coding gene Chr16:42296992-42379819 (-)



Homology
more
  • Human Ortholog
    CD200LP, CD200 like, pseudogene
  • Vertebrate Orthologs
    5
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    CD200LP, CD200 like, pseudogene
  • Links
    NCBI Gene ID: 125775242

  • Chr Location
    3q13.2
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    2 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    10
  • GO References
    3
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    597
  • cDNA Data
    3
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000053182 Ensembl Gene Model | MGI Sequence Detail 81202 C57BL/6J ±  kb
transcript ENSMUST00000114585 Ensembl | MGI Sequence Detail 2122 Not Applicable  
polypeptide ENSMUSP00000110233 Ensembl | MGI Sequence Detail 300 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    4 Sequences
  • InterPro Domains
    IPR003599 Immunoglobulin domain subtype
    IPR036179 Immunoglobulin-like domain superfamily
    IPR013783 Immunoglobulin-like fold
    IPR013106 Immunoglobulin V-set domain
    IPR033321 OX-2 membrane glycoprotein, immunoglobulin variable domain
    IPR047164 OX-2 membrane glycoprotein-like
  • GlyGen
    E9Q573 1 site
Molecular
Reagents
less
  • All nucleic 3
    cDNA 3

    Microarray probesets 1
Other
Accession IDs
less
MGI:2686595, MGI:7285968
References
more
  • Summaries
    All 22
    Gene Ontology 3
    Phenotypes 2
  • Earliest
    J:82808 Strausberg RL, et al., Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Proc Natl Acad Sci U S A. 2002 Dec 24;99(26):16899-903
  • Latest
    J:324898 Kojima T, et al., Novel CD200 homologues iSEC1 and iSEC2 are gastrointestinal secretory cell-specific ligands of inhibitory receptor CD200R. Sci Rep. 2016 Nov 7;6:36457
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
09/01/2026
MGI 6.24 		The Jackson Laboratory