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Ranbp6 Gene Detail
Summary
  • Symbol
    Ranbp6
  • Name
    RAN binding protein 6
  • Feature Type
    protein coding gene
  • IDs
    MGI:2683212
    NCBI Gene: 240614
  • Alliance
    gene page
  • Transcription Start Sites
    2 TSS
Location &
Maps
more
  • Sequence Map
    Chr19:29785800-29790374 bp, - strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 19, 24.42 cM
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2683212
 protein coding gene Chr19:29785508-29790374 (-)
129S1/SvImJ MGP_129S1SvImJ_G0025028
 protein coding gene Chr19:28284573-28289147 (-)
A/J MGP_AJ_G0025005
 protein coding gene Chr19:26878133-26882707 (-)
AKR/J MGP_AKRJ_G0024973
 protein coding gene Chr19:27830066-27834640 (-)
BALB/cJ MGP_BALBcJ_G0025004
 protein coding gene Chr19:26914885-26919459 (-)
C3H/HeJ MGP_C3HHeJ_G0024760
 protein coding gene Chr19:27806373-27810947 (-)
C57BL/6NJ MGP_C57BL6NJ_G0025445
 protein coding gene Chr19:29052774-29057348 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0022864
 protein coding gene Chr19:26824525-26829074 (-)
CAST/EiJ MGP_CASTEiJ_G0024230
 protein coding gene Chr19:27645393-27649961 (-)
CBA/J MGP_CBAJ_G0024738
 protein coding gene Chr19:30426017-30430591 (-)
DBA/2J MGP_DBA2J_G0024870
 protein coding gene Chr19:26824365-26828939 (-)
FVB/NJ MGP_FVBNJ_G0024832
 protein coding gene Chr19:26664528-26669102 (-)
LP/J MGP_LPJ_G0024955
 protein coding gene Chr19:28282337-28286911 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0024859
 protein coding gene Chr19:30350992-30355566 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0025500
 protein coding gene Chr19:27850346-27854920 (-)
PWK/PhJ MGP_PWKPhJ_G0023978
 protein coding gene Chr19:26488888-26493453 (-)
SPRET/EiJ MGP_SPRETEiJ_G0023782
 protein coding gene Chr19:27139351-27143901 (-)
WSB/EiJ MGP_WSBEiJ_G0024297
 protein coding gene Chr19:27893858-27898432 (-)



Homology
more
  • Human Ortholog
    RANBP6, RAN binding protein 6
  • Vertebrate Orthologs
    3
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    RANBP6, RAN binding protein 6
  • Links
    NCBI Gene ID: 26953
    neXtProt AC: NX_O60518
    UniProt: O60518

  • Chr Location
    9p24.1; chr9:6011025-6015625 (-)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    1 phenotype reference
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    7
  • GO References
    2
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    43
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000074909 Ensembl Gene Model | MGI Sequence Detail 4575 C57BL/6J ±  kb
transcript ENSMUST00000099525 Ensembl | MGI Sequence Detail 4575 Not Applicable  
polypeptide ENSMUSP00000100503 Ensembl | MGI Sequence Detail 1105 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 43
    cDNA 43

    Microarray probesets 2
References
more
  • Summaries
    All 21
    Gene Ontology 2
    Phenotypes 1
  • Earliest
    J:82808 Strausberg RL, et al., Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Proc Natl Acad Sci U S A. 2002 Dec 24;99(26):16899-903
  • Latest
    J:263419 Distler U, et al., In-depth protein profiling of the postsynaptic density from mouse hippocampus using data-independent acquisition proteomics. Proteomics. 2014 Nov;14(21-22):2607-13
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
04/16/2024
MGI 6.23 		The Jackson Laboratory