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B3gnt4 Gene Detail
Summary
  • Symbol
    B3gnt4
  • Name
    UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 4
  • Synonyms
    1010001G17Rik
Location &
Maps
more
  • Sequence Map
    Chr5:123648523-123649945 bp, + strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 5, 63.02 cM
  • Mapping Data
    3 experiments
Strain
Comparison
more
  • SNPs within 2kb
    97 from dbSNP Build 142
  • Strain Annotations
    19
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2680208
 protein coding gene Chr5:123646519-123649945 (+)
129S1/SvImJ ENSMUSG00200023923
 protein coding gene Chr5:117369898-117371320 (+)
A/J ENSMUSG00195011752
 protein coding gene Chr5:116891344-116892766 (+)
AKR/J ENSMUSG00220035305
 protein coding gene Chr5:116404320-116405742 (+)
BALB/cJ ENSMUSG00180031251
 protein coding gene Chr5:117006299-117007721 (+)
C3H/HeJ ENSMUSG00175028864
 protein coding gene Chr5:119024139-119025561 (+)
C57BL/6NJ ENSMUSG00215024828
 protein coding gene Chr5:117056908-117058330 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0027729
 protein coding gene Chr5:116521873-116523295 (+)
CAST/EiJ ENSTCUG00005036029
 protein coding gene Chr5:116312452-116313874 (+)
CBA/J ENSMUSG00210009317
 protein coding gene Chr5:117774888-117776310 (+)
DBA/2J ENSMUSG00185052175
 protein coding gene Chr5:120826141-120827563 (+)
FVB/NJ ENSMUSG00205039483
 protein coding gene Chr5:116686741-116688163 (+)
JF1/MsJ ENSUMUG00000014777
 protein coding gene Chr5:123690412-123691834 (+)
LP/J ENSMUSG00230043909
 protein coding gene Chr5:124891853-124893275 (+)
NOD/ShiLtJ ENSMUSG00190035933
 protein coding gene Chr5:116700541-116701963 (+)
NZO/HlLtJ ENSMUSG00225013062
 protein coding gene Chr5:132589769-132591191 (+)
PWK/PhJ ENSLUMG00010037524
 protein coding gene Chr5:115582505-115583927 (+)
SPRET/EiJ ENSMSPG00010041939
 protein coding gene Chr5:118890267-118891689 (+)
WSB/EiJ ENSIUOG00005014310
 protein coding gene Chr5:119390271-119391693 (+)



Homology
more
  • Human Ortholog
    B3GNT4, UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 4
  • Vertebrate Orthologs
    2
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    B3GNT4, UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 4
  • Synonyms
    B3GN-T4, beta3Gn-T4
  • Links
    NCBI Gene ID: 79369
    UniProt: Q9C0J1

  • Chr Location
    12q24.31; chr12:122203681-122208952 (+)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    6 phenotype references
  • All Mutations and Alleles
    3
  • Chemically induced (other)
    1
  • Radiation induced
    1
  • Targeted
    1
  • Genomic Mutations
    2 involving B3gnt4
  • Incidental Mutations
    APF , CvDC
  • Find Mice (IMSR)
    15 strains or lines available
Gene Ontology
(GO)
Classifications
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  • All GO Annotations
    18
  • GO References
    9
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
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Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    695
  • Tissues
    96
  • cDNA Data
    5
  • Literature Summary
    2
Sequences &
Gene Models
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Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000029431 Ensembl Gene Model | MGI Sequence Detail 1423 C57BL/6J ±  kb
transcript ENSMUST00000031384 Ensembl | MGI Sequence Detail 1423 Not Applicable  
polypeptide ENSMUSP00000031384 Ensembl | MGI Sequence Detail 350 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 8
    cDNA 5
    Primer pair 2
    Other 1

    Microarray probesets 2
Other
Accession IDs
less
MGI:1915655
References
more
  • Summaries
    All 35
    Developmental Gene Expression 2
    Gene Ontology 9
    Phenotypes 6
  • Earliest
    J:134667 Roderick TH, et al., Two radiation-induced chromosomal inversions in mice (Mus musculus). Proc Natl Acad Sci U S A. 1970 Oct;67(2):961-7
  • Latest
    J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
09/01/2026
MGI 6.24 		The Jackson Laboratory