Cypt2 MGI Mouse Gene Detail - MGI:2676331 - cysteine-rich perinuclear theca 2

Sequence Map

ChrX:104543378-104544245 bp, + strand
From NCBI annotation of GRCm39
View this region in JBrowse
Genome Browsers

Ensembl | UCSC | NCBI

For selected strains:

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_2676331	protein coding gene	ChrX:104543363-104544245 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0035997	protein coding gene	ChrX:102286641-102287508 (+)
A/J	MGP_AJ_G0036172	protein coding gene	ChrX:150570304-150571138 (+)
AKR/J	MGP_AKRJ_G0035895	protein coding gene	ChrX:105295490-105296357 (+)
BALB/cJ	MGP_BALBcJ_G0036163	protein coding gene	ChrX:148744319-148745153 (+)
C3H/HeJ	MGP_C3HHeJ_G0035673	protein coding gene	ChrX:102725084-102725951 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0036493	protein coding gene	ChrX:105208634-105209501 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0033321	protein coding gene	ChrX:99597347-99598196 (+)
CAST/EiJ	MGP_CASTEiJ_G0034959	protein coding gene	ChrX:86898364-86899273 (+)
CBA/J	MGP_CBAJ_G0035648	protein coding gene	ChrX:108528818-108529685 (+)
DBA/2J	MGP_DBA2J_G0035802	protein coding gene	ChrX:101365213-101366080 (+)
FVB/NJ	MGP_FVBNJ_G0035743	protein coding gene	ChrX:100659826-100660693 (+)
LP/J	MGP_LPJ_G0035895	protein coding gene	ChrX:103234545-103235889 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0035775	protein coding gene	ChrX:113186788-113187655 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0036519	protein coding gene	ChrX:101931318-101932185 (+)
PWK/PhJ	MGP_PWKPhJ_G0034856	protein coding gene	ChrX:127903695-127904529 (+)
SPRET/EiJ	no annotation
WSB/EiJ	no annotation

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Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.

Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.

Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.

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Expression Overview

GXD's primary emphasis is on endogenous gene expression during development. Click on grid cells to view annotations.

Blue cells = expressed in wild-type.
Gray triangles = other expression annotations only
(e.g. absence of expression or data from mutants).

early conceptus	embryo ectoderm	embryo endoderm	embryo mesoderm	embryo mesenchyme	extraembryonic component	alimentary system	auditory system	branchial arches	cardiovascular system	connective tissue	endocrine system	exocrine system	hemolymphoid system	integumental system	limbs	liver and biliary system	musculoskeletal system	nervous system	olfactory system	reproductive system	respiratory system	urinary system	visual system

Click cells to view annotations.

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			Length	Strain/Species	Flank
genomic	245566	NCBI Gene Model \| MGI Sequence Detail	868	C57BL/6J	± kb
transcript	NM_173436	RefSeq \| MGI Sequence Detail	712	C57BL/6
polypeptide	NP_775612	RefSeq \| MGI Sequence Detail	180	C57BL/6

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Summaries

All 15

Phenotypes 1
Earliest

J:100561 Kitamura K, et al., Characterization of a novel postacrosomal perinuclear theca-specific protein, CYPT1. Biol Reprod. 2004 Dec;71(6):1927-35
Latest

J:105251 Hansen MA, et al., Identification and expression profiling of 10 novel spermatid expressed CYPT genes. Mol Reprod Dev. 2006 Feb 13;73(5):568-579

TSS for Cypt2:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr161752	ChrX:104543374-104543379 (+)	-1 bp

Contributing Projects: Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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