About   Help   FAQ
Crxos Gene Detail
Summary
  • Symbol
    Crxos
  • Name
    cone-rod homeobox, opposite strand
  • Synonyms
    Crxos1, Egam1
Location &
Maps
more
  • Sequence Map
    Chr7:15616542-15637945 bp, + strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 7, 8.60 cM
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    695 from dbSNP Build 142
  • Strain Annotations
    26
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2451355
 protein coding gene Chr7:15616542-15637964 (+)
129S1/SvImJ ENSMUSGG00200054431
 protein coding gene Chr7:8992902-8997034 (+)
129S1/SvImJ ENSMUSG00200038799
 protein coding gene Chr7:9009771-9012144 (+)
A/J ENSMUSGG00195055429
 protein coding gene Chr7:9465817-9469952 (+)
A/J ENSMUSG00195045788
 protein coding gene Chr7:9471290-9473668 (+)
AKR/J ENSMUSG00220025672
 protein coding gene Chr7:7754795-7757173 (+)
AKR/J ENSMUSGG00220054874
 protein coding gene Chr7:7749322-7753457 (+)
BALB/cJ ENSMUSGG00180055078
 protein coding gene Chr7:9370069-9374201 (+)
BALB/cJ ENSMUSG00180049485
 protein coding gene Chr7:9386944-9389317 (+)
C3H/HeJ ENSMUSGG00175055128
 protein coding gene Chr7:9849851-9853983 (+)
C3H/HeJ ENSMUSG00175038158
 protein coding gene Chr7:9866726-9869099 (+)
C57BL/6NJ ENSMUSG00215039795
 protein coding gene Chr7:9134185-9136567 (+)
C57BL/6NJ ENSMUSGG00215055246
 protein coding gene Chr7:9128727-9132854 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0029216
 protein coding gene Chr7:14912126-14918825 (+)
CAST/EiJ no annotation
CBA/J ENSMUSGG00210054533
 protein coding gene Chr7:9084972-9089104 (+)
CBA/J ENSMUSG00210045846
 protein coding gene Chr7:9101841-9104214 (+)
DBA/2J ENSMUSGG00185057374
 protein coding gene Chr7:12599439-12603571 (+)
DBA/2J ENSMUSG00185050563
 protein coding gene Chr7:12616313-12618686 (+)
FVB/NJ ENSMUSGG00205054152
 protein coding gene Chr7:9493432-9497559 (+)
FVB/NJ ENSMUSG00205019331
 protein coding gene Chr7:9498894-9501272 (+)
JF1/MsJ no annotation
LP/J ENSMUSG00230040202
 protein coding gene Chr7:16834221-16836594 (+)
LP/J ENSMUSGG00230055508
 protein coding gene Chr7:16817351-16821483 (+)
NOD/ShiLtJ ENSMUSGG00190054514
 protein coding gene Chr7:5920973-5925100 (+)
NOD/ShiLtJ ENSMUSG00190044472
 protein coding gene Chr7:5926433-5928811 (+)
NZO/HlLtJ ENSMUSGG00225055150
 protein coding gene Chr7:14026209-14030340 (+)
NZO/HlLtJ ENSMUSG00225051250
 protein coding gene Chr7:14068788-14071162 (+)
PWK/PhJ no annotation
SPRET/EiJ no annotation
WSB/EiJ no annotation



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    6 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    10
  • GO References
    12
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    664
  • Tissues
    57
  • cDNA Data
    18
  • Literature Summary
    9
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 546024 NCBI Gene Model | MGI Sequence Detail 21404 C57BL/6J ±  kb
transcript NR_038092 RefSeq | MGI Sequence Detail 2251 C57BL/6  
polypeptide Q3UL53 UniProt | EBI | MGI Sequence Detail 246 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    2 Sequences
  • InterPro Domains
    IPR050720 Engrailed Homeobox Transcription Factors
    IPR001356 Homeodomain
    IPR009057 Homeodomain-like superfamily
Molecular
Reagents
less
  • All nucleic 23
    cDNA 18
    Primer pair 5

    Microarray probesets 4
Other
Accession IDs
less
MGI:3584364
References
more
  • Summaries
    All 45
    Developmental Gene Expression 9
    Gene Ontology 12
    Phenotypes 6
  • Earliest
    J:47659 Sasaki N, et al., Characterization of gene expression in mouse blastocyst using single-pass sequencing of 3995 clones. (Errata 1998;54:583). Genomics. 1998 Apr 15;49(2):167-79
  • Latest
    J:244597 Cui W, et al., Towards Functional Annotation of the Preimplantation Transcriptome: An RNAi Screen in Mammalian Embryos. Sci Rep. 2016 Nov 21;6:37396
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
Warranty Disclaimer, Privacy Notice, Licensing, & Copyright
Send questions and comments to User Support. 		last database update
09/08/2026
MGI 6.24 		The Jackson Laboratory