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A630072M18Rik Gene Detail
Summary
  • Symbol
    A630072M18Rik
  • Name
    RIKEN cDNA A630072M18 gene
  • Feature Type
    lncRNA gene
  • IDs
    MGI:2444702
    NCBI Gene: 320770
  • Alliance
    gene page
  • Transcription Start Sites
    7 TSS
Location &
Maps
more
  • Sequence Map
    Chr5:21155987-21161396 bp, + strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 5, 9.83 cM
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    7 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2444702
 lncRNA gene Chr5:21155987-21161396 (+)
129S1/SvImJ MGP_129S1SvImJ_G0004038
 antisense lncRNA gene Chr5:18475575-18480992 (+)
A/J MGP_AJ_G0004018
 antisense lncRNA gene Chr5:17892468-17897867 (+)
AKR/J MGP_AKRJ_G0003997
 antisense lncRNA gene Chr5:18569166-18574599 (+)
BALB/cJ MGP_BALBcJ_G0004005
 antisense lncRNA gene Chr5:18320624-18326026 (+)
C3H/HeJ MGP_C3HHeJ_G0003951
 antisense lncRNA gene Chr5:18623473-18628884 (+)
C57BL/6NJ MGP_C57BL6NJ_G0004153
 antisense lncRNA gene Chr5:19844016-19849420 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0003633
 antisense lncRNA gene Chr5:15963485-15969590 (+)
CAST/EiJ MGP_CASTEiJ_G0003914
 antisense lncRNA gene Chr5:17964064-17969694 (+)
CBA/J MGP_CBAJ_G0003945
 antisense lncRNA gene Chr5:20061213-20066612 (+)
DBA/2J MGP_DBA2J_G0003959
 antisense lncRNA gene Chr5:18170080-18175481 (+)
FVB/NJ MGP_FVBNJ_G0003979
 antisense lncRNA gene Chr5:17583541-17588950 (+)
LP/J MGP_LPJ_G0004040
 antisense lncRNA gene Chr5:18889475-18894881 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0003967
 antisense lncRNA gene Chr5:21378699-21384103 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0004148
 antisense lncRNA gene Chr5:18235477-18240885 (+)
PWK/PhJ MGP_PWKPhJ_G0003868
 antisense lncRNA gene Chr5:17234248-17239954 (+)
SPRET/EiJ MGP_SPRETEiJ_G0003813
 antisense lncRNA gene Chr5:17595955-17601465 (+)
WSB/EiJ MGP_WSBEiJ_G0003950
 antisense lncRNA gene Chr5:18284728-18290129 (+)



Homology
less
Human Diseases
less
  • References
    1 with disease annotations
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    12 phenotype references
  • All Mutations and Alleles
    13
  • Chemically induced (other)
    2
  • Gene trapped
    9
  • Radiation induced
    1
  • Spontaneous
    1
  • Genomic Mutations
    4 involving A630072M18Rik
  • Find Mice (IMSR)
    2 strains or lines available
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    8
Sequences &
Gene Models
less
  • All Sequences
    30
  • RefSeq
    1
Representative SequencesLengthStrain/SpeciesFlank
genomic 320770 NCBI Gene Model | MGI Sequence Detail 5410 C57BL/6J ±  kb
transcript NR_030699 RefSeq | MGI Sequence Detail 5410 C57BL/6  
For the selected sequence
Molecular
Reagents
less
  • All nucleic 8
    cDNA 8

    Microarray probesets 1
References
more
  • Summaries
    All 20
    Diseases 1
    Phenotypes 12
  • Earliest
    J:109968 Roderick TH, et al., Nineteen paracentric chromosomal inversions in mice. Genetics. 1974 Jan;76(1):109-17
  • Latest
    J:142754 Hansen GM, et al., Large-scale gene trapping in C57BL/6N mouse embryonic stem cells. Genome Res. 2008 Oct;18(10):1670-9
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
04/16/2024
MGI 6.23 		The Jackson Laboratory