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Tmem104 Gene Detail
Summary
  • Symbol
    Tmem104
  • Name
    transmembrane protein 104
  • Synonyms
    C630005D06Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:2444222
    NCBI Gene: 320534
  • Alliance
    gene page
  • Transcription Start Sites
    5 TSS
Location &
Maps
more
  • Sequence Map
    Chr11:115078313-115137849 bp, + strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 11, 80.69 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    545 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2444222
 protein coding gene Chr11:115078313-115137851 (+)
129S1/SvImJ MGP_129S1SvImJ_G0019375
 protein coding gene Chr11:119189516-119250837 (+)
A/J MGP_AJ_G0019344
 protein coding gene Chr11:113988549-114049342 (+)
AKR/J MGP_AKRJ_G0019314
 protein coding gene Chr11:117388297-117449640 (+)
BALB/cJ MGP_BALBcJ_G0019318
 protein coding gene Chr11:114406136-114465894 (+)
C3H/HeJ MGP_C3HHeJ_G0019124
 protein coding gene Chr11:117741864-117803169 (+)
C57BL/6NJ MGP_C57BL6NJ_G0019768
 protein coding gene Chr11:122829796-122895148 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0017391
 protein coding gene Chr11:111031528-111090389 (+)
CAST/EiJ MGP_CASTEiJ_G0018679
 protein coding gene Chr11:119049162-119113295 (+)
CBA/J MGP_CBAJ_G0019096
 protein coding gene Chr11:127678017-127740687 (+)
DBA/2J MGP_DBA2J_G0019207
 protein coding gene Chr11:113428618-113487614 (+)
FVB/NJ MGP_FVBNJ_G0019199
 protein coding gene Chr11:112899873-112959504 (+)
LP/J MGP_LPJ_G0019277
 protein coding gene Chr11:119568656-119635586 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0019232
 protein coding gene Chr11:126856576-126919729 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0019806
 protein coding gene Chr11:118049476-118112458 (+)
PWK/PhJ MGP_PWKPhJ_G0018443
 protein coding gene Chr11:114704049-114765209 (+)
SPRET/EiJ MGP_SPRETEiJ_G0018236
 protein coding gene Chr11:117794198-117853892 (+)
WSB/EiJ MGP_WSBEiJ_G0018731
 protein coding gene Chr11:117993648-118055648 (+)



Homology
more
  • Human Ortholog
    TMEM104, transmembrane protein 104
  • Vertebrate Orthologs
    3
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    TMEM104, transmembrane protein 104
  • Synonyms
    SLC38A12
  • Links
    NCBI Gene ID: 54868
    neXtProt AC: NX_Q8NE00
    UniProt: Q8NE00

  • Chr Location
    17q25.1; chr17:74776499-74839753 (+)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    4 phenotypes from 1 allele in 1 genetic background
    5 phenotype references
Phenotype Overview

adipose tissue
behavior/neurological
cardiovascular system
cellular
craniofacial
digestive/alimentary system
embryo
endocrine/exocrine glands
growth/size/body
hearing/vestibular/ear
hematopoietic system
homeostasis/metabolism
integument
immune system
limbs/digits/tail
liver/biliary system
mortality/aging
muscle
nervous system
pigmentation
renal/urinary system
reproductive system
respiratory system
skeleton
taste/olfaction
neoplasm
vision/eye

Click cells to view annotations.
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    1
  • GO References
    1
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    719
  • Tissues
    13
  • cDNA Data
    30
  • Literature Summary
    1
  • Comparison Matrix
    Gene Expression + Phenotype
    • Sequences &
    Gene Models
    less
    Representative SequencesLengthStrain/SpeciesFlank
    genomic ENSMUSG00000045980 Ensembl Gene Model | MGI Sequence Detail 59537 C57BL/6J ±  kb
    transcript ENSMUST00000061450 Ensembl | MGI Sequence Detail 4564 Not Applicable  
    polypeptide ENSMUSP00000056805 Ensembl | MGI Sequence Detail 496 Not Applicable  
    For the selected sequence
    Protein
    Information
    less
    Molecular
    Reagents
    less
    • All nucleic 30
      cDNA 30

      Microarray probesets 4
    References
    more
    • Summaries
      All 26
      Developmental Gene Expression 1
      Gene Ontology 1
      Phenotypes 5
    • Earliest
      J:80000 The FANTOM Consortium and The RIKEN Genome Exploration Research Group Phase I & II Team, Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Nature. 2002;420:563-573
    • Latest
      J:228563 Koscielny G, et al., The International Mouse Phenotyping Consortium Web Portal, a unified point of access for knockout mice and related phenotyping data. Nucleic Acids Res. 2014 Jan;42(Database issue):D802-9
    Contributing Projects:
    Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
    Citing These Resources
    Funding Information
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    Send questions and comments to User Support.     		last database update
    04/09/2024
    MGI 6.23     		The Jackson Laboratory