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E030042O20Rik Gene Detail
Summary
  • Symbol
    E030042O20Rik
  • Name
    RIKEN cDNA E030042O20 gene
  • Feature Type
    lncRNA gene
  • IDs
    MGI:2444099
    NCBI Gene: 320474
  • Alliance
    gene page
Location &
Maps
more
  • Sequence Map
    Chr2:75537709-75541464 bp, + strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 2, 44.76 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    56 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2444099
 lncRNA gene Chr2:75535114-75546239 (+)
129S1/SvImJ MGP_129S1SvImJ_G0015430
 unclassified non-coding RNA gene Chr2:76071063-76078034 (+)
A/J MGP_AJ_G0015405
 unclassified non-coding RNA gene Chr2:73092944-73098222 (+)
AKR/J MGP_AKRJ_G0015369
 unclassified non-coding RNA gene Chr2:75064999-75070253 (+)
BALB/cJ MGP_BALBcJ_G0015369
 unclassified non-coding RNA gene Chr2:73284380-73289646 (+)
C3H/HeJ MGP_C3HHeJ_G0015193
 unclassified non-coding RNA gene Chr2:75269219-75274494 (+)
C57BL/6NJ MGP_C57BL6NJ_G0015823
 unclassified non-coding RNA gene Chr2:78338667-78343921 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0013563
 unclassified non-coding RNA gene Chr2:70509565-70514832 (+)
CAST/EiJ MGP_CASTEiJ_G0014744
 unclassified non-coding RNA gene Chr2:75592279-75597505 (+)
CBA/J MGP_CBAJ_G0015172
 unclassified non-coding RNA gene Chr2:81194527-81199802 (+)
DBA/2J MGP_DBA2J_G0015267
 unclassified non-coding RNA gene Chr2:72689101-72694366 (+)
FVB/NJ MGP_FVBNJ_G0015274
 unclassified non-coding RNA gene Chr2:72077724-72082970 (+)
LP/J MGP_LPJ_G0015347
 unclassified non-coding RNA gene Chr2:75923855-75929110 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0015300
 unclassified non-coding RNA gene Chr2:83087232-83092494 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0015862
 unclassified non-coding RNA gene Chr2:75195563-75200795 (+)
PWK/PhJ MGP_PWKPhJ_G0014532
 unclassified non-coding RNA gene Chr2:72650541-72655757 (+)
SPRET/EiJ MGP_SPRETEiJ_G0014320
 unclassified non-coding RNA gene Chr2:75429598-75434982 (+)
WSB/EiJ MGP_WSBEiJ_G0014851
 unclassified non-coding RNA gene Chr2:75650995-75656218 (+)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    5 phenotype references
Gene Ontology
(GO)
Classifications
less
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    3
Sequences &
Gene Models
less
  • All Sequences
    28
  • RefSeq
    2
Representative SequencesLengthStrain/SpeciesFlank
genomic 320474 NCBI Gene Model | MGI Sequence Detail 3756 C57BL/6J ±  kb
transcript NR_190114 RefSeq | MGI Sequence Detail 3578 C57BL/6  
For the selected sequence
Molecular
Reagents
less
  • All nucleic 3
    cDNA 3

    Microarray probesets 1
References
more
  • Summaries
    All 14
    Phenotypes 5
  • Earliest
    J:80000 The FANTOM Consortium and The RIKEN Genome Exploration Research Group Phase I & II Team, Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Nature. 2002;420:563-573
  • Latest
    J:269738 Guerreiro I, et al., Reorganisation of Hoxd regulatory landscapes during the evolution of a snake-like body plan. Elife. 2016 Aug 1;5:e16087
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
04/16/2024
MGI 6.23 		The Jackson Laboratory