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Acsm5 Gene Detail
Summary
  • Symbol
    Acsm5
  • Name
    acyl-CoA synthetase medium-chain family member 5
  • Synonyms
    C730027J19Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:2444086
    NCBI Gene: 272428
  • Alliance
    genome feature page
  • Transcription Start Sites
    5 TSS
Location &
Maps
more
  • Sequence Map
    Chr7:119125354-119142583 bp, + strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 7, 63.94 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    601 from dbSNP Build 142
  • Strain Annotations
    19
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2444086
 protein coding gene Chr7:119118686-119144774 (+)
129S1/SvImJ ENSMUSG00200021329
 protein coding gene Chr7:105636364-105662454 (+)
A/J ENSMUSG00195035059
 protein coding gene Chr7:110155543-110181639 (+)
AKR/J ENSMUSG00220019530
 protein coding gene Chr7:103597129-103623219 (+)
BALB/cJ ENSMUSG00180025390
 protein coding gene Chr7:106818746-106844841 (+)
C3H/HeJ ENSMUSG00175021192
 protein coding gene Chr7:107532298-107558396 (+)
C57BL/6NJ ENSMUSG00215040404
 protein coding gene Chr7:106791542-106817633 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0030378
 protein coding gene Chr7:121685907-121704217 (+)
CAST/EiJ ENSTCUG00005043140
 protein coding gene Chr7:110100654-110126719 (+)
CBA/J ENSMUSG00210022730
 protein coding gene Chr7:107254839-107280936 (+)
DBA/2J ENSMUSG00185042338
 protein coding gene Chr7:111605833-111631929 (+)
FVB/NJ ENSMUSG00205014085
 protein coding gene Chr7:107253782-107279879 (+)
JF1/MsJ ENSUMUG00000042369
 protein coding gene Chr7:116667964-116693653 (+)
LP/J ENSMUSG00230030672
 protein coding gene Chr7:117723303-117749391 (+)
NOD/ShiLtJ ENSMUSG00190024933
 protein coding gene Chr7:107467730-107493818 (+)
NZO/HlLtJ ENSMUSG00225038482
 protein coding gene Chr7:115962363-115988459 (+)
PWK/PhJ ENSLUMG00010012493
 protein coding gene Chr7:105799706-105825802 (+)
SPRET/EiJ ENSMSPG00010008898
 protein coding gene Chr7:107011911-107033086 (+)
WSB/EiJ ENSIUOG00005010601
 protein coding gene Chr7:108136062-108161682 (+)



Homology
more
  • Human Ortholog
    ACSM5, acyl-CoA synthetase medium chain family member 5
  • Vertebrate Orthologs
    3
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    ACSM5, acyl-CoA synthetase medium chain family member 5
  • Links
    NCBI Gene ID: 54988
    UniProt: Q6NUN0

  • Chr Location
    16p12.3; chr16:20409308-20441337 (+)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    6 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    12
  • GO References
    6
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    694
  • Tissues
    97
  • cDNA Data
    13
  • Literature Summary
    2
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 272428 NCBI Gene Model | MGI Sequence Detail 17230 C57BL/6J ±  kb
transcript NM_178758 RefSeq | MGI Sequence Detail 2505 FVB/N  
polypeptide Q8BGA8 UniProt | EBI | MGI Sequence Detail 578 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 13
    cDNA 13

    Microarray probesets 3
References
more
  • Summaries
    All 32
    Developmental Gene Expression 2
    Gene Ontology 6
    Phenotypes 6
  • Earliest
    J:80000 The FANTOM Consortium and The RIKEN Genome Exploration Research Group Phase I & II Team, Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Nature. 2002;420:563-573
  • Latest
    J:345621 Adams DJ, et al., Genetic determinants of micronucleus formation in vivo. Nature. 2024 Mar;627(8002):130-136
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
09/08/2026
MGI 6.24 		The Jackson Laboratory