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Itgbl1 Gene Detail
Summary
  • Symbol
    Itgbl1
  • Name
    integrin, beta-like 1
  • Synonyms
    B930011D01Rik, with EGF-like repeat domains
  • Feature Type
    protein coding gene
  • IDs
    MGI:2443439
    NCBI Gene: 223272
  • Alliance
    gene page
  • Transcription Start Sites
    4 TSS
Location &
Maps
more
  • Sequence Map
    Chr14:123897383-124213030 bp, + strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 14, 66.10 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    740 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2443439
 protein coding gene Chr14:123897331-124215173 (+)
129S1/SvImJ MGP_129S1SvImJ_G0021678
 protein coding gene Chr14:121604101-121891564 (+)
A/J MGP_AJ_G0021638
 protein coding gene Chr14:116901571-117188670 (+)
AKR/J MGP_AKRJ_G0021614
 protein coding gene Chr14:120668788-120993079 (+)
BALB/cJ MGP_BALBcJ_G0021644
 protein coding gene Chr14:117452635-117762695 (+)
C3H/HeJ MGP_C3HHeJ_G0021421
 protein coding gene Chr14:120563673-120875365 (+)
C57BL/6NJ MGP_C57BL6NJ_G0022084
 protein coding gene Chr14:126263365-126567189 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0019622
 protein coding gene Chr14:112661184-112901242 (+)
CAST/EiJ MGP_CASTEiJ_G0020937
 protein coding gene Chr14:118453774-118735673 (+)
CBA/J MGP_CBAJ_G0021390
 protein coding gene Chr14:131082871-131396488 (+)
DBA/2J MGP_DBA2J_G0021513
 protein coding gene Chr14:116776914-117043312 (+)
FVB/NJ MGP_FVBNJ_G0021491
 protein coding gene Chr14:115083607-115390415 (+)
LP/J MGP_LPJ_G0021581
 protein coding gene Chr14:122518175-122816605 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0021518
 protein coding gene Chr14:136069755-136444331 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0022107
 protein coding gene Chr14:120229232-120509019 (+)
PWK/PhJ MGP_PWKPhJ_G0020681
 protein coding gene Chr14:113793885-114050357 (+)
SPRET/EiJ MGP_SPRETEiJ_G0020519
 protein coding gene Chr14:116430709-116683757 (+)
WSB/EiJ MGP_WSBEiJ_G0020993
 protein coding gene Chr14:120899850-121171365 (+)



Homology
more
  • Human Ortholog
    ITGBL1, integrin subunit beta like 1
  • Vertebrate Orthologs
    3
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    ITGBL1, integrin subunit beta like 1
  • Synonyms
    OSCP, TIED
  • Links
    NCBI Gene ID: 9358
    neXtProt AC: NX_O95965
    UniProt: O95965

  • Chr Location
    13q33.1; chr13:101452593-101720856 (+)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    5 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    13
  • GO References
    3
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    776
  • Tissues
    14
  • cDNA Data
    14
  • Literature Summary
    3
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000032925 Ensembl Gene Model | MGI Sequence Detail 315648 C57BL/6J ±  kb
transcript ENSMUST00000049681 Ensembl | MGI Sequence Detail 4065 Not Applicable  
polypeptide ENSMUSP00000059019 Ensembl | MGI Sequence Detail 494 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 14
    cDNA 14

    Microarray probesets 3
References
more
  • Summaries
    All 30
    Developmental Gene Expression 3
    Gene Ontology 3
    Phenotypes 5
  • Earliest
    J:80000 The FANTOM Consortium and The RIKEN Genome Exploration Research Group Phase I & II Team, Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Nature. 2002;420:563-573
  • Latest
    J:341147 Young RE, et al., Smooth Muscle Differentiation Is Essential for Airway Size, Tracheal Cartilage Segmentation, but Dispensable for Epithelial Branching. Dev Cell. 2020 Apr 6;53(1):73-85.e5
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
04/16/2024
MGI 6.23 		The Jackson Laboratory