A530053G22Rik MGI Mouse Gene Detail - MGI:2443347

Sequence Map

Chr6:60374151-60380692 bp, - strand
From NCBI annotation of GRCm39
View this region in JBrowse
Genome Browsers

Ensembl | UCSC | NCBI

For selected strains:

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_2443347	lncRNA gene	Chr6:60256028-60380692 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0015636	unclassified non-coding RNA gene	Chr6:60019097-60152784 (-)
A/J	MGP_AJ_G0015612	unclassified non-coding RNA gene	Chr6:57378915-57494684 (-)
AKR/J	MGP_AKRJ_G0015575	unclassified non-coding RNA gene	Chr6:59268650-59391016 (-)
BALB/cJ	MGP_BALBcJ_G0015574	unclassified non-coding RNA gene	Chr6:57747306-57873627 (-)
C3H/HeJ	MGP_C3HHeJ_G0015396	unclassified non-coding RNA gene	Chr6:59269430-59403496 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0016027	unclassified non-coding RNA gene	Chr6:61323052-61478850 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	MGP_CASTEiJ_G0014952	unclassified non-coding RNA gene	Chr6:58822070-58951845 (+)
CBA/J	MGP_CBAJ_G0015377	unclassified non-coding RNA gene	Chr6:63873290-64038186 (-)
DBA/2J	MGP_DBA2J_G0015471	unclassified non-coding RNA gene	Chr6:57081429-57208224 (-)
FVB/NJ	MGP_FVBNJ_G0015478	unclassified non-coding RNA gene	Chr6:56651468-56774317 (-)
LP/J	MGP_LPJ_G0015552	unclassified non-coding RNA gene	Chr6:59946305-60079666 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0015501	unclassified non-coding RNA gene	Chr6:66869546-66889115 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0016069	unclassified non-coding RNA gene	Chr6:59142164-59272735 (-)
PWK/PhJ	MGP_PWKPhJ_G0014735	unclassified non-coding RNA gene	Chr6:56179402-56187183 (-)
SPRET/EiJ	no annotation
WSB/EiJ	MGP_WSBEiJ_G0015056	unclassified non-coding RNA gene	Chr6:59369928-59371214 (-)

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Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.

Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.

Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.

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Expression Overview

GXD's primary emphasis is on endogenous gene expression during development. Click on grid cells to view annotations.

Blue cells = expressed in wild-type.
Gray triangles = other expression annotations only
(e.g. absence of expression or data from mutants).

early conceptus	embryo ectoderm	embryo endoderm	embryo mesoderm	embryo mesenchyme	extraembryonic component	alimentary system	auditory system	branchial arches	cardiovascular system	connective tissue	endocrine system	exocrine system	hemolymphoid system	integumental system	limbs	liver and biliary system	musculoskeletal system	nervous system	olfactory system	reproductive system	respiratory system	urinary system	visual system

Click cells to view annotations.

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			Length	Strain/Species	Flank
genomic	208079	NCBI Gene Model \| MGI Sequence Detail	6542	C57BL/6J	± kb
transcript	NR_160794	RefSeq \| MGI Sequence Detail	718	C57BL/6
polypeptide	Q8BNW1	UniProt \| EBI \| MGI Sequence Detail	100	Not Applicable

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Summaries

All 13

Phenotypes 1
Earliest

J:80000 The FANTOM Consortium and The RIKEN Genome Exploration Research Group Phase I & II Team, Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Nature. 2002;420:563-573
Latest

J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582

TSS for A530053G22Rik:

(View these features in JBrowse)

Contributing Projects: Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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