B230354K17Rik MGI Mouse Gene Detail - MGI:2443272

Sequence Map

Chr17:45744757-45753470 bp, + strand
From NCBI annotation of GRCm39
View this region in JBrowse
Genome Browsers

Ensembl | UCSC | NCBI

For selected strains:

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_2443272	lncRNA gene	Chr17:45744524-45753470 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0005735	lincRNA gene	Chr17:46438437-46448118 (+)
A/J	MGP_AJ_G0005723	lincRNA gene	Chr17:45333889-45342398 (+)
AKR/J	MGP_AKRJ_G0005702	lincRNA gene	Chr17:45636329-45646184 (+)
BALB/cJ	MGP_BALBcJ_G0005703	lincRNA gene	Chr17:45223671-45232140 (+)
C3H/HeJ	MGP_C3HHeJ_G0005651	lincRNA gene	Chr17:46349517-46357964 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0005863	lincRNA gene	Chr17:48441610-48450672 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0005214	lincRNA gene	Chr17:42131467-42140711 (+)
CAST/EiJ	MGP_CASTEiJ_G0005593	lincRNA gene	Chr17:46443967-46452661 (+)
CBA/J	MGP_CBAJ_G0005639	lincRNA gene	Chr17:50163623-50172093 (+)
DBA/2J	MGP_DBA2J_G0005657	lincRNA gene	Chr17:44125798-44134196 (+)
FVB/NJ	MGP_FVBNJ_G0005683	lincRNA gene	Chr17:43699250-43708690 (+)
LP/J	MGP_LPJ_G0005738	lincRNA gene	Chr17:47089671-47098848 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0005668	lincRNA gene	Chr17:49731007-49740333 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0005863	lincRNA gene	Chr17:45997044-46005735 (+)
PWK/PhJ	MGP_PWKPhJ_G0005537	lincRNA gene	Chr17:43428002-43436831 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0005456	lincRNA gene	Chr17:42865977-42874636 (+)
WSB/EiJ	MGP_WSBEiJ_G0005645	lincRNA gene	Chr17:46523196-46531642 (+)

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Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.

Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.

Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.

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Expression Overview

GXD's primary emphasis is on endogenous gene expression during development. Click on grid cells to view annotations.

Blue cells = expressed in wild-type.
Gray triangles = other expression annotations only
(e.g. absence of expression or data from mutants).

early conceptus	embryo ectoderm	embryo endoderm	embryo mesoderm	embryo mesenchyme	extraembryonic component	alimentary system	auditory system	branchial arches	cardiovascular system	connective tissue	endocrine system	exocrine system	hemolymphoid system	integumental system	limbs	liver and biliary system	musculoskeletal system	nervous system	olfactory system	reproductive system	respiratory system	urinary system	visual system

Click cells to view annotations.

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			Length	Strain/Species	Flank
genomic	105246278	NCBI Gene Model \| MGI Sequence Detail	8714	C57BL/6J	± kb
transcript	NR_130960	RefSeq \| MGI Sequence Detail	4918	C57BL/6
polypeptide	Q8BNK1	UniProt \| EBI \| MGI Sequence Detail	210	Not Applicable

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Summaries

All 15

Developmental Gene Expression 1
Earliest

J:80000 The FANTOM Consortium and The RIKEN Genome Exploration Research Group Phase I & II Team, Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Nature. 2002;420:563-573
Latest

J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582

TSS for B230354K17Rik:

(View these features in JBrowse)

Contributing Projects: Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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