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6330549D23Rik Pseudogene Detail
Summary
  • Symbol
    6330549D23Rik
  • Name
    RIKEN cDNA 6330549D23 gene
  • Feature Type
    pseudogene
  • IDs
    MGI:2442586
    NCBI Gene: 229613
  • Alliance
    gene page
Location &
Maps
more
  • Sequence Map
    Chr3:96514940-96516041 bp, - strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 3, 41.93 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    24 from dbSNP Build 142
  • Strain Annotations
    17
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2442586
 pseudogene Chr3:96513978-96537135 (-)
129S1/SvImJ MGP_129S1SvImJ_G0039706
 pseudogene Chr3:97489883-97515017 (-)
A/J MGP_AJ_G0039704
 pseudogene Chr3:94371597-94396312 (-)
AKR/J MGP_AKRJ_G0039630
 pseudogene Chr3:96592863-96620712 (-)
BALB/cJ MGP_BALBcJ_G0039674
 pseudogene Chr3:94181514-94206190 (-)
C3H/HeJ MGP_C3HHeJ_G0039336
 pseudogene Chr3:96903048-96928463 (-)
C57BL/6NJ MGP_C57BL6NJ_G0040235
 pseudogene Chr3:101044433-101073443 (-)
CAROLI/EiJ no annotation
CAST/EiJ MGP_CASTEiJ_G0038456
 pseudogene Chr3:96152732-96181701 (-)
CBA/J MGP_CBAJ_G0039307
 pseudogene Chr3:104741080-104769087 (-)
DBA/2J MGP_DBA2J_G0039501
 pseudogene Chr3:93702677-93726602 (-)
FVB/NJ MGP_FVBNJ_G0039459
 pseudogene Chr3:91712941-91737254 (-)
LP/J MGP_LPJ_G0039540
 pseudogene Chr3:98774869-98800077 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0039461
 pseudogene Chr3:110810435-110864263 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0040336
 pseudogene Chr3:96210889-96238215 (-)
PWK/PhJ MGP_PWKPhJ_G0038132
 pseudogene Chr3:93537341-93561236 (-)
SPRET/EiJ MGP_SPRETEiJ_G0037881
 pseudogene Chr3:94513313-94537086 (-)
WSB/EiJ MGP_WSBEiJ_G0038690
 pseudogene Chr3:96659756-96683819 (-)



Homology
less
Human Diseases
less
  • References
    1 with disease annotations
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    8 phenotype references
  • All Mutations and Alleles
    5
  • Chemically induced (other)
    1
  • Gene trapped
    1
  • Radiation induced
    1
  • Targeted
    2
  • Genomic Mutations
    2 involving 6330549D23Rik
  • Find Mice (IMSR)
    5 strains or lines available
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    6
Sequences &
Gene Models
less
  • All Sequences
    28
  • RefSeq
    1
  • UniProt
    2
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000045327 Ensembl Gene Model | MGI Sequence Detail 1102 C57BL/6J ±  kb
transcript ENSMUST00000159536 Ensembl | MGI Sequence Detail 1102 Not Applicable  
polypeptide Q8CCV6 UniProt | EBI | MGI Sequence Detail 187 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    2 Sequences
  • InterPro Domains
    IPR039841 Integrator complex subunit 14
    IPR045814 Integrator complex subunit 14, beta-barrel domain
Molecular
Reagents
less
  • All nucleic 6
    cDNA 6

    Microarray probesets 2
References
more
  • Summaries
    All 19
    Diseases 1
    Phenotypes 8
  • Earliest
    J:70677 Cook SA, et al., Mouse paracentric inversion In(3)55Rk mutates the urate oxidase gene. Cytogenet Cell Genet. 2001;93(1-2):77-82
  • Latest
    J:302829 Lu J, et al., Mouse models for human hyperuricaemia: a critical review. Nat Rev Rheumatol. 2019 Jul;15(7):413-426
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
04/16/2024
MGI 6.23 		The Jackson Laboratory