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5031425F14Rik Gene Detail
Summary
  • Symbol
    5031425F14Rik
  • Name
    RIKEN cDNA 5031425F14 gene
  • Feature Type
    lncRNA gene
  • IDs
    MGI:2442533
    NCBI Gene: 319684
  • Alliance
    gene page
  • Transcription Start Sites
    1 TSS
Location &
Maps
more
  • Sequence Map
    Chr2:166289371-166300690 bp, + strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 2, 86.85 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    84 from dbSNP Build 142
  • Strain Annotations
    14
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2442533
 lncRNA gene Chr2:166289371-166301152 (+)
129S1/SvImJ MGP_129S1SvImJ_G0006073
 lincRNA gene Chr2:172101405-172113993 (+)
A/J MGP_AJ_G0006064
 lincRNA gene Chr2:165026399-165040293 (+)
AKR/J MGP_AKRJ_G0006040
 lincRNA gene Chr2:169953825-169964683 (+)
BALB/cJ no annotation
C3H/HeJ MGP_C3HHeJ_G0005990
 lincRNA gene Chr2:170314312-170326765 (+)
C57BL/6NJ MGP_C57BL6NJ_G0006202
 lincRNA gene Chr2:177096827-177108448 (+)
CAROLI/EiJ no annotation
CAST/EiJ MGP_CASTEiJ_G0005927
 lincRNA gene Chr2:170747886-170762793 (+)
CBA/J no annotation
DBA/2J MGP_DBA2J_G0005995
 lincRNA gene Chr2:164175659-164190152 (+)
FVB/NJ MGP_FVBNJ_G0006020
 lincRNA gene Chr2:162662140-162674716 (+)
LP/J MGP_LPJ_G0006077
 lincRNA gene Chr2:172124056-172136959 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0006009
 lincRNA gene Chr2:187004856-187018504 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0006204
 lincRNA gene Chr2:169856580-169867955 (+)
PWK/PhJ MGP_PWKPhJ_G0005873
 lincRNA gene Chr2:163804373-163817692 (+)
SPRET/EiJ MGP_SPRETEiJ_G0005783
 lincRNA gene Chr2:168784943-168797589 (+)
WSB/EiJ no annotation



Homology
less
Gene Ontology
(GO)
Classifications
less
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    4
Sequences &
Gene Models
less
  • All Sequences
    25
  • RefSeq
    1
Representative SequencesLengthStrain/SpeciesFlank
genomic 319684 NCBI Gene Model | MGI Sequence Detail 11320 C57BL/6J ±  kb
transcript NR_015558 RefSeq | MGI Sequence Detail 1636 C57BL/6  
For the selected sequence
Molecular
Reagents
less
  • All nucleic 4
    cDNA 4
References
more
  • Summaries
    All 7
  • Earliest
    J:80000 The FANTOM Consortium and The RIKEN Genome Exploration Research Group Phase I & II Team, Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Nature. 2002;420:563-573
  • Latest
    J:99680 The FANTOM Consortium and RIKEN Genome Exploration Research Group and Genome Science Group (Genome Network Project Core Group), The Transcriptional Landscape of the Mammalian Genome. Science. 2005;309(5740):1559-1563
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
04/09/2024
MGI 6.23 		The Jackson Laboratory