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Cd300lf Gene Detail
Summary
  • Symbol
    Cd300lf
  • Name
    CD300 molecule like family member F
  • Synonyms
    CLM-1, DIgR2, F730004D16Rik, IgSF13, IREM1, LMIR3, Pigr3
  • Feature Type
    protein coding gene
  • IDs
    MGI:2442359
    NCBI Gene: 246746
  • Alliance
    genome feature page
  • Transcription Start Sites
    8 TSS
Location &
Maps
more
  • Sequence Map
    Chr11:115007040-115024818 bp, - strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 11, 80.59 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    694 from dbSNP Build 142
  • Strain Annotations
    19
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2442359
 protein coding gene Chr11:115007040-115024834 (-)
129S1/SvImJ ENSMUSG00200051179
 protein coding gene Chr11:112377185-112394980 (-)
A/J ENSMUSG00195024579
 protein coding gene Chr11:112079331-112097123 (-)
AKR/J ENSMUSG00220032002
 protein coding gene Chr11:112180249-112198041 (-)
BALB/cJ ENSMUSG00180048333
 protein coding gene Chr11:112377819-112395611 (-)
C3H/HeJ ENSMUSG00175044034
 protein coding gene Chr11:112331247-112349033 (-)
C57BL/6NJ ENSMUSG00215009859
 protein coding gene Chr11:111866894-111884674 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0017387
 protein coding gene Chr11:110961633-110980340 (-)
CAST/EiJ ENSTCUG00005036885
 protein coding gene Chr11:111735933-111753701 (-)
CBA/J ENSMUSG00210013714
 protein coding gene Chr11:112051261-112069062 (-)
DBA/2J ENSMUSG00185026393
 protein coding gene Chr11:112370062-112387861 (-)
FVB/NJ ENSMUSG00205033477
 protein coding gene Chr11:112170484-112188209 (-)
JF1/MsJ ENSUMUG00000050478
 protein coding gene Chr11:112639338-112657216 (-)
LP/J ENSMUSG00230047833
 protein coding gene Chr11:113424663-113442446 (-)
NOD/ShiLtJ ENSMUSG00190044962
 protein coding gene Chr11:112401734-112419520 (-)
NZO/HlLtJ ENSMUSG00225051910
 protein coding gene Chr11:115479851-115497638 (-)
PWK/PhJ ENSLUMG00010015111
 protein coding gene Chr11:112153133-112171040 (-)
SPRET/EiJ ENSMSPG00010036904
 protein coding gene Chr11:112664552-112682506 (-)
WSB/EiJ ENSIUOG00005045875
 protein coding gene Chr11:112139755-112157623 (-)



Homology
more
  • Human Ortholog
    CD300LF, CD300 molecule like family member f
  • Vertebrate Orthologs
    2
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    CD300LF, CD300 molecule like family member f
  • Synonyms
    CD300f, CLM-1, CLM1, IgSF13, IREM-1, IREM1, LMIR3, NKIR
  • Links
    NCBI Gene ID: 146722
    UniProt: Q8TDQ1

  • Chr Location
    17q25.1; chr17:74694308-74712981 (-)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    14 phenotypes from 2 alleles in 2 genetic backgrounds
    34 phenotype references
Phenotype Overview

adipose tissue
behavior/neurological
cardiovascular system
cellular
craniofacial
digestive/alimentary system
embryo
endocrine/exocrine glands
growth/size/body
hearing/vestibular/ear
hematopoietic system
homeostasis/metabolism
integument
immune system
limbs/digits/tail
liver/biliary system
mortality/aging
muscle
nervous system
pigmentation
renal/urinary system
reproductive system
respiratory system
skeleton
taste/olfaction
neoplasm
vision/eye

Click cells to view annotations.
Mice homozygous for a knock-out allele exhibit increased severity of experimental autoimmune encephalomyelitis with increased demyelination.
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    24
  • GO References
    12
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    603
  • Tissues
    5
  • cDNA Data
    19
  • Literature Summary
    3
  • Comparison Matrix
    Gene Expression + Phenotype
    • Sequences &
    Gene Models
    less
    Representative SequencesLengthStrain/SpeciesFlank
    genomic ENSMUSG00000047798 Ensembl Gene Model | MGI Sequence Detail 17779 C57BL/6J ±  kb
    transcript ENSMUST00000106561 Ensembl | MGI Sequence Detail 1885 Not Applicable  
    polypeptide ENSMUSP00000102171 Ensembl | MGI Sequence Detail 337 Not Applicable  
    For the selected sequence
    Protein
    Information
    less
    Molecular
    Reagents
    less
    • All nucleic 21
      cDNA 19
      Primer pair 2

      Microarray probesets 2
    References
    more
    • Summaries
      All 71
      Developmental Gene Expression 3
      Gene Ontology 12
      Phenotypes 34
    • Earliest
      J:80000 The FANTOM Consortium and The RIKEN Genome Exploration Research Group Phase I & II Team, Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Nature. 2002;420:563-573
    • Latest
      J:357792 Ali-Ruiz D, et al., Microglial CD300f immune receptor contributes to the maintenance of neuron viability in vitro and after a penetrating brain injury. Sci Rep. 2023 Oct 5;13(1):16796
    Contributing Projects:
    Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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    Funding Information
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    Send questions and comments to User Support.     		last database update
    09/08/2026
    MGI 6.24     		The Jackson Laboratory