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C230012O17Rik Gene Detail
Summary
  • Symbol
    C230012O17Rik
  • Name
    RIKEN cDNA C230012O17 gene
  • Feature Type
    lncRNA gene
  • IDs
    MGI:2442283
    NCBI Gene: 319564
  • Alliance
    gene page
Location &
Maps
more
  • Sequence Map
    Chr4:24961287-24967475 bp, - strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 4, 10.53 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    48 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2442283
 lncRNA gene Chr4:24960790-24967475 (-)
129S1/SvImJ MGP_129S1SvImJ_G0015536
 unclassified non-coding RNA gene Chr4:22080919-22087574 (-)
A/J MGP_AJ_G0015513
 unclassified non-coding RNA gene Chr4:21429030-21435685 (-)
AKR/J MGP_AKRJ_G0015477
 unclassified non-coding RNA gene Chr4:21917228-21923883 (-)
BALB/cJ MGP_BALBcJ_G0015475
 unclassified non-coding RNA gene Chr4:21498084-21504739 (-)
C3H/HeJ MGP_C3HHeJ_G0015298
 unclassified non-coding RNA gene Chr4:22102726-22109385 (-)
C57BL/6NJ MGP_C57BL6NJ_G0015929
 unclassified non-coding RNA gene Chr4:23008743-23015402 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0013664
 unclassified non-coding RNA gene Chr4:19907754-19915029 (-)
CAST/EiJ MGP_CASTEiJ_G0014852
 unclassified non-coding RNA gene Chr4:21800329-21805358 (-)
CBA/J MGP_CBAJ_G0015279
 unclassified non-coding RNA gene Chr4:23669002-23675661 (-)
DBA/2J MGP_DBA2J_G0015373
 unclassified non-coding RNA gene Chr4:21324433-21331092 (-)
FVB/NJ MGP_FVBNJ_G0015380
 unclassified non-coding RNA gene Chr4:20976394-20983049 (-)
LP/J MGP_LPJ_G0015452
 unclassified non-coding RNA gene Chr4:22211527-22218847 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0015404
 unclassified non-coding RNA gene Chr4:25137932-25144587 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0015970
 unclassified non-coding RNA gene Chr4:21873068-21879719 (-)
PWK/PhJ MGP_PWKPhJ_G0014638
 unclassified non-coding RNA gene Chr4:21060502-21067298 (-)
SPRET/EiJ MGP_SPRETEiJ_G0014426
 unclassified non-coding RNA gene Chr4:21649408-21656732 (-)
WSB/EiJ MGP_WSBEiJ_G0014958
 unclassified non-coding RNA gene Chr4:21823401-21830052 (-)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    2 phenotype references
Gene Ontology
(GO)
Classifications
less
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    5
Sequences &
Gene Models
less
  • All Sequences
    32
  • RefSeq
    4
  • UniProt
    2
Representative SequencesLengthStrain/SpeciesFlank
genomic 319564 NCBI Gene Model | MGI Sequence Detail 6189 C57BL/6J ±  kb
transcript AK048707 GenBank | ENA | DDBJ | MGI Sequence Detail 3002 C57BL/6J  
polypeptide Q3U5A8 UniProt | EBI | MGI Sequence Detail 177 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    2 Sequences
Molecular
Reagents
less
  • All nucleic 5
    cDNA 5
References
more
  • Summaries
    All 12
    Phenotypes 2
  • Earliest
    J:80000 The FANTOM Consortium and The RIKEN Genome Exploration Research Group Phase I & II Team, Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Nature. 2002;420:563-573
  • Latest
    J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
04/16/2024
MGI 6.23 		The Jackson Laboratory