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9930038B18Rik Gene Detail
Summary
  • Symbol
    9930038B18Rik
  • Name
    RIKEN cDNA 9930038B18 gene
  • Feature Type
    lncRNA gene
  • IDs
    MGI:2442156
    NCBI Gene: 319503
  • Alliance
    gene page
Location &
Maps
more
  • Sequence Map
    Chr12:8926509-8943445 bp, - strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 12, 3.95 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    192 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2442156
 lncRNA gene Chr12:8923187-8943473 (-)
129S1/SvImJ MGP_129S1SvImJ_G0005342
 lincRNA gene Chr12:5948200-5952472 (-)
A/J MGP_AJ_G0005325
 lincRNA gene Chr12:5782510-5786782 (-)
AKR/J MGP_AKRJ_G0005305
 lincRNA gene Chr12:6167990-6172262 (-)
BALB/cJ MGP_BALBcJ_G0005307
 lincRNA gene Chr12:5909461-5913733 (-)
C3H/HeJ MGP_C3HHeJ_G0005256
 lincRNA gene Chr12:6001593-6005865 (-)
C57BL/6NJ MGP_C57BL6NJ_G0005461
 lincRNA gene Chr12:6134970-6139242 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0004848
 lincRNA gene Chr12:5589510-5593802 (-)
CAST/EiJ MGP_CASTEiJ_G0005203
 lincRNA gene Chr12:5994029-5998313 (-)
CBA/J MGP_CBAJ_G0005245
 lincRNA gene Chr12:6670338-6674610 (-)
DBA/2J MGP_DBA2J_G0005263
 lincRNA gene Chr12:5734402-5738674 (-)
FVB/NJ MGP_FVBNJ_G0005288
 lincRNA gene Chr12:5712143-5716415 (-)
LP/J MGP_LPJ_G0005344
 lincRNA gene Chr12:6000533-6004805 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0005270
 lincRNA gene Chr12:6480239-6484511 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0005463
 lincRNA gene Chr12:5914161-5918433 (-)
PWK/PhJ MGP_PWKPhJ_G0005152
 lincRNA gene Chr12:5809235-5813508 (-)
SPRET/EiJ MGP_SPRETEiJ_G0005072
 lincRNA gene Chr12:5920878-5925142 (-)
WSB/EiJ MGP_WSBEiJ_G0005251
 lincRNA gene Chr12:5968116-5972397 (-)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    2 phenotype references
Gene Ontology
(GO)
Classifications
less
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    4
Sequences &
Gene Models
less
  • All Sequences
    26
  • RefSeq
    1
  • UniProt
    1
Representative SequencesLengthStrain/SpeciesFlank
genomic 319503 NCBI Gene Model | MGI Sequence Detail 16937 C57BL/6J ±  kb
transcript AK037014 GenBank | ENA | DDBJ | MGI Sequence Detail 3871 C57BL/6J  
polypeptide Q8BGP8 UniProt | EBI | MGI Sequence Detail 149 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    1 Sequence
Molecular
Reagents
less
  • All nucleic 4
    cDNA 4
References
more
  • Summaries
    All 11
    Phenotypes 2
  • Earliest
    J:80000 The FANTOM Consortium and The RIKEN Genome Exploration Research Group Phase I & II Team, Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Nature. 2002;420:563-573
  • Latest
    J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
05/14/2024
MGI 6.23 		The Jackson Laboratory