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Gatd1 Gene Detail
Summary
  • Symbol
    Gatd1
  • Name
    glutamine amidotransferase like class 1 domain containing 1
  • Synonyms
    D230016J19Rik, MGC:38368, Pddc1
  • Feature Type
    protein coding gene
  • IDs
    MGI:2387178
    NCBI Gene: 213350
  • Alliance
  • Transcription Start Sites
    3 TSS
Location &
Maps
more
  • Sequence Map
    Chr7:140988097-140994038 bp, - strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
  • Genetic Map
    Chromosome 7, 86.75 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    10 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2387178
protein coding gene Chr7:140987707-140994049 (-)
129S1/SvImJ MGP_129S1SvImJ_G0033227
protein coding gene Chr7:146595272-146601273 (-)
A/J MGP_AJ_G0033209
protein coding gene Chr7:142401429-142407430 (-)
AKR/J MGP_AKRJ_G0033141
protein coding gene Chr7:146337476-146343477 (-)
BALB/cJ MGP_BALBcJ_G0033210
protein coding gene Chr7:142147521-142153522 (-)
C3H/HeJ MGP_C3HHeJ_G0032924
protein coding gene Chr7:146092675-146098676 (-)
C57BL/6NJ MGP_C57BL6NJ_G0033721
protein coding gene Chr7:151948537-151954538 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0030694
protein coding gene Chr7:143614377-143620435 (-)
CAST/EiJ MGP_CASTEiJ_G0032254
protein coding gene Chr7:138401739-138408393 (-)
CBA/J MGP_CBAJ_G0032896
protein coding gene Chr7:157103061-157109062 (-)
DBA/2J MGP_DBA2J_G0033048
protein coding gene Chr7:140349294-140355290 (-)
FVB/NJ MGP_FVBNJ_G0033001
protein coding gene Chr7:140264336-140270337 (-)
LP/J MGP_LPJ_G0033143
protein coding gene Chr7:148092336-148098337 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0033034
protein coding gene Chr7:157741149-157749395 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0033741
protein coding gene Chr7:145309383-145316729 (-)
PWK/PhJ MGP_PWKPhJ_G0031958
protein coding gene Chr7:133631314-133637650 (-)
SPRET/EiJ MGP_SPRETEiJ_G0031805
protein coding gene Chr7:132142316-132148289 (-)
WSB/EiJ MGP_WSBEiJ_G0032365
protein coding gene Chr7:146258364-146264632 (-)



Homology
more
  • Human Ortholog
    GATD1, glutamine amidotransferase class 1 domain containing 1
  • Vertebrate Orthologs
    3
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    GATD1, glutamine amidotransferase class 1 domain containing 1
  • Synonyms
    FERRY5, Fy-5, PDDC1
  • Links
    NCBI Gene ID: 347862
    neXtProt AC: NX_Q8NB37
    UniProt: Q8NB37

  • Chr Location
    11p15.5; chr11:767220-777488 (-)  GRCh38

Mutations,
Alleles, and
Phenotypes
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  • Phenotype Summary
    9 phenotype references
Gene Ontology
(GO)
Classifications
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  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
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Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • cDNA Data
Sequences &
Gene Models
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Representative SequencesLengthStrain/SpeciesFlank
genomic 213350 NCBI Gene Model | MGI Sequence Detail 5942 C57BL/6J ±  kb
transcript NM_172116 RefSeq | MGI Sequence Detail 1497 C57BL/6  
polypeptide Q8BFQ8 UniProt | EBI | MGI Sequence Detail 220 Not Applicable  
For the selected sequence
Protein
Information
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  • UniProt
    1 Sequence
  • Protein Ontology
    PR:000030579 glutamine amidotransferase-like class 1 domain-containing protein 1
  • InterPro Domains
    IPR029062 Class I glutamine amidotransferase-like
Molecular
Reagents
less
  • All nucleic 41
    cDNA 41

    Microarray probesets 3
Other
Accession IDs
less
MGI:2442661
References
more
  • Summaries
    All 29
    Gene Ontology 2
    Phenotypes 9
  • Earliest
    J:65007 Cattanach BM, et al., Two imprinted gene mutations: three phenotypes. Hum Mol Genet. 2000 Sep 22;9(15):2263-73
  • Latest
    J:265628 Gaudet P, et al., Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief Bioinform. 2011 Sep;12(5):449-62

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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last database update
03/19/2024
MGI 6.23
The Jackson Laboratory