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Galnt5 Gene Detail
Summary
  • Symbol
    Galnt5
  • Name
    polypeptide N-acetylgalactosaminyltransferase 5
  • Synonyms
    ppGaNTase-T5
  • Feature Type
    protein coding gene
  • IDs
    MGI:2179403
    NCBI Gene: 241391
  • Alliance
Location &
Maps
more
  • Sequence Map
    Chr2:57887832-57931039 bp, + strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
  • Genetic Map
    Chromosome 2, 32.93 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    377 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2179403
protein coding gene Chr2:57887832-57935872 (+)
129S1/SvImJ MGP_129S1SvImJ_G0025745
protein coding gene Chr2:57533880-57581961 (+)
A/J MGP_AJ_G0025721
protein coding gene Chr2:55330811-55379353 (+)
AKR/J MGP_AKRJ_G0025691
protein coding gene Chr2:56859712-56908358 (+)
BALB/cJ MGP_BALBcJ_G0025716
protein coding gene Chr2:55428100-55474206 (+)
C3H/HeJ MGP_C3HHeJ_G0025477
protein coding gene Chr2:56935750-56982580 (+)
C57BL/6NJ MGP_C57BL6NJ_G0026162
protein coding gene Chr2:59283120-59328973 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0023568
protein coding gene Chr2:52928889-52974817 (+)
CAST/EiJ MGP_CASTEiJ_G0024942
protein coding gene Chr2:56950350-56998845 (+)
CBA/J MGP_CBAJ_G0025457
protein coding gene Chr2:61477381-61524750 (+)
DBA/2J MGP_DBA2J_G0025588
protein coding gene Chr2:54946725-54994221 (+)
FVB/NJ MGP_FVBNJ_G0025550
protein coding gene Chr2:54481585-54527369 (+)
LP/J MGP_LPJ_G0025676
protein coding gene Chr2:57406428-57453318 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0025581
protein coding gene Chr2:63202910-63252197 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0026220
protein coding gene Chr2:56830654-56877055 (+)
PWK/PhJ MGP_PWKPhJ_G0024683
protein coding gene Chr2:54773853-54819818 (+)
SPRET/EiJ MGP_SPRETEiJ_G0024489
protein coding gene Chr2:56958586-57004051 (+)
WSB/EiJ MGP_WSBEiJ_G0025009
protein coding gene Chr2:57131593-57178355 (+)



Homology
more
  • Human Ortholog
    GALNT5, polypeptide N-acetylgalactosaminyltransferase 5
  • Vertebrate Orthologs
    2
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    GALNT5, polypeptide N-acetylgalactosaminyltransferase 5
  • Synonyms
    GALNACT5, GALNAC-T5
  • Links
    NCBI Gene ID: 11227
    neXtProt AC: NX_Q7Z7M9
    UniProt: Q7Z7M9

  • Chr Location
    2q24.1; chr2:157257705-157318491 (+)  GRCh38

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    1 phenotype from multigenic genotypes
    5 phenotype references
An unpublished knockout mutation is reported to have no overt phenotypic consequences.
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • Tissues
  • cDNA Data
  • Literature Summary
Sequences &
Gene Models
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Representative SequencesLengthStrain/SpeciesFlank
genomic 241391 NCBI Gene Model | MGI Sequence Detail 43208 C57BL/6J ±  kb
transcript NM_172855 RefSeq | MGI Sequence Detail 3247 Not Specified  
polypeptide Q8C102 UniProt | EBI | MGI Sequence Detail 930 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 12
    Genomic 2
    cDNA 7
    Primer pair 3

    Microarray probesets 1
References
more
  • Summaries
    All 30
    Developmental Gene Expression 9
    Gene Ontology 3
    Phenotypes 5
  • Earliest
    J:74107 Kingsley PD, et al., Diverse spatial expression patterns of UDP-GalNAc:polypeptide N-acetylgalactosaminyl-transferase family member mRNAs during mouse development. Glycobiology. 2000 Dec;10(12):1317-23
  • Latest
    J:285242 Peluso G, et al., Loss of the disease-associated glycosyltransferase Galnt3 alters Muc10 glycosylation and the composition of the oral microbiome. J Biol Chem. 2020 Jan 31;295(5):1411-1425

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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last database update
03/19/2024
MGI 6.23
The Jackson Laboratory