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Tubgcp5 Gene Detail
Summary
  • Symbol
    Tubgcp5
  • Name
    tubulin, gamma complex component 5
  • Synonyms
    B130010C12Rik, GCP5
  • Feature Type
    protein coding gene
  • IDs
    MGI:2178836
    NCBI Gene: 233276
  • Alliance
  • Transcription Start Sites
    2 TSS
Location &
Maps
more
  • Sequence Map
    Chr7:55443873-55481207 bp, + strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
  • Genetic Map
    Chromosome 7, 33.42 cM
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    594 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2178836
protein coding gene Chr7:55443873-55481425 (+)
129S1/SvImJ MGP_129S1SvImJ_G0032312
protein coding gene Chr7:56600524-56640151 (+)
A/J MGP_AJ_G0032291
protein coding gene Chr7:55739232-55778177 (+)
AKR/J MGP_AKRJ_G0032227
protein coding gene Chr7:57051188-57088938 (+)
BALB/cJ MGP_BALBcJ_G0032303
protein coding gene Chr7:55359578-55398678 (+)
C3H/HeJ MGP_C3HHeJ_G0032016
protein coding gene Chr7:57397720-57435477 (+)
C57BL/6NJ MGP_C57BL6NJ_G0032796
protein coding gene Chr7:59163079-59205328 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0029803
protein coding gene Chr7:58415932-58454338 (+)
CAST/EiJ MGP_CASTEiJ_G0031345
protein coding gene Chr7:48605587-48642613 (+)
CBA/J MGP_CBAJ_G0031981
protein coding gene Chr7:61208938-61248655 (+)
DBA/2J MGP_DBA2J_G0032138
protein coding gene Chr7:54765011-54803043 (+)
FVB/NJ MGP_FVBNJ_G0032092
protein coding gene Chr7:54722593-54760516 (+)
LP/J MGP_LPJ_G0032219
protein coding gene Chr7:57659473-57698867 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0032129
protein coding gene Chr7:60735225-60776505 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0032813
protein coding gene Chr7:56035688-56074031 (+)
PWK/PhJ MGP_PWKPhJ_G0031065
protein coding gene Chr7:48030979-48068573 (+)
SPRET/EiJ MGP_SPRETEiJ_G0030906
protein coding gene Chr7:44085133-44126655 (+)
WSB/EiJ MGP_WSBEiJ_G0031463
protein coding gene Chr7:56677137-56716148 (+)



Homology
more
  • Human Ortholog
    TUBGCP5, tubulin gamma complex component 5
  • Vertebrate Orthologs
    3
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    TUBGCP5, tubulin gamma complex component 5
  • Synonyms
    GCP5
  • Links
    NCBI Gene ID: 114791
    neXtProt AC: NX_Q96RT8
    UniProt: Q96RT8

  • Chr Location
    15q11.2; chr15:22983025-23039572 (-)  GRCh38

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    8 phenotype references
Gene Ontology
(GO)
Classifications
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  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • cDNA Data
Sequences &
Gene Models
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Representative SequencesLengthStrain/SpeciesFlank
genomic 233276 NCBI Gene Model | MGI Sequence Detail 37335 C57BL/6J ±  kb
transcript NM_146190 RefSeq | MGI Sequence Detail 3716 C57BL/6  
polypeptide Q8BKN5 UniProt | EBI | MGI Sequence Detail 1024 Not Applicable  
For the selected sequence
Protein
Information
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  • UniProt
    7 Sequences
  • Protein Ontology
    PR:000016830 gamma-tubulin complex component 5
  • InterPro Domains
    IPR040457 Gamma tubulin complex component, C-terminal
    IPR042241 Gamma-tubulin complex component, C-terminal domain superfamily
    IPR007259 Gamma-tubulin complex component protein
    IPR041470 Gamma tubulin complex component protein, N-terminal
Molecular
Reagents
less
  • All nucleic 101
    cDNA 101

    Microarray probesets 6
Other
Accession IDs
less
MGI:2442147
References
more
  • Summaries
    All 31
    Gene Ontology 4
    Phenotypes 8
  • Earliest
    J:80000 The FANTOM Consortium and The RIKEN Genome Exploration Research Group Phase I & II Team, Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Nature. 2002;420:563-573
  • Latest
    J:326541 Cyagen Biosciences Inc., Cyagen Biosciences Website. 2022;

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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last database update
03/12/2024
MGI 6.23
The Jackson Laboratory