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Wdr87-ps Pseudogene Detail
Summary
  • Symbol
    Wdr87-ps
  • Name
    WD repeat domain 87, pseudogene
  • Synonyms
    4932431P20Rik
Location &
Maps
more
  • Sequence Map
    Chr7:29223968-29237289 bp, + strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 7, 17.07 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    13 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2149781
 pseudogene Chr7:29218688-29237289 (+)
129S1/SvImJ MGP_129S1SvImJ_G0031984
 protein coding gene Chr7:28449320-28467703 (+)
A/J MGP_AJ_G0031962
 protein coding gene Chr7:27695338-27715011 (+)
AKR/J MGP_AKRJ_G0031895
 protein coding gene Chr7:28425545-28446213 (+)
BALB/cJ MGP_BALBcJ_G0031969
 protein coding gene Chr7:27892561-27911311 (+)
C3H/HeJ MGP_C3HHeJ_G0031688
 protein coding gene Chr7:28823772-28851956 (+)
C57BL/6NJ MGP_C57BL6NJ_G0032434
 protein coding gene Chr7:29357048-29380842 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0029484
 protein coding gene Chr7:28746204-28764645 (+)
CAST/EiJ MGP_CASTEiJ_G0031022
 protein coding gene Chr7:22093879-22115083 (+)
CBA/J MGP_CBAJ_G0031654
 protein coding gene Chr7:30736668-30758056 (+)
DBA/2J MGP_DBA2J_G0031806
 protein coding gene Chr7:27433962-27452372 (+)
FVB/NJ MGP_FVBNJ_G0031763
 protein coding gene Chr7:27556861-27575667 (+)
LP/J MGP_LPJ_G0031886
 protein coding gene Chr7:28754152-28775629 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0031798
 protein coding gene Chr7:30081544-30102870 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0032463
 protein coding gene Chr7:27908831-27929334 (+)
PWK/PhJ MGP_PWKPhJ_G0030748
 protein coding gene Chr7:22495640-22515160 (+)
SPRET/EiJ MGP_SPRETEiJ_G0030581
 protein coding gene Chr7:18924575-18942908 (+)
WSB/EiJ MGP_WSBEiJ_G0031132
 protein coding gene Chr7:28307614-28308953 (+)



Homology
more
  • Human Ortholog
    WDR87, WD repeat domain 87
  • Vertebrate Orthologs
    1
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    WDR87, WD repeat domain 87
  • Synonyms
    NYD-SP11
  • Links
    NCBI Gene ID: 83889
    neXtProt AC: NX_Q6ZQQ6
    UniProt: Q6ZQQ6

  • Chr Location
    19q13.13; chr19:37884823-37906697 (-)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    2 phenotype references
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    1
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000074224 Ensembl Gene Model | MGI Sequence Detail 13322 C57BL/6J ±  kb
transcript ENSMUST00000141713 Ensembl | MGI Sequence Detail 9288 Not Applicable  
polypeptide Q3V0H8 UniProt | EBI | MGI Sequence Detail 335 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    1 Sequence
Molecular
Reagents
less
  • All nucleic 4
    Genomic 2
    cDNA 2

    Microarray probesets 4
References
more
  • Summaries
    All 20
    Phenotypes 2
  • Earliest
    J:80000 The FANTOM Consortium and The RIKEN Genome Exploration Research Group Phase I & II Team, Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Nature. 2002;420:563-573
  • Latest
    J:345524 Liao HQ, et al., WDR87 interacts with CFAP47 protein in the middle piece of spermatozoa flagella to participate in sperm tail assembly. Mol Hum Reprod. 2022 Dec 28;29(1)
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
04/16/2024
MGI 6.23 		The Jackson Laboratory