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Snord61 Gene Detail
Summary
  • Symbol
    Snord61
  • Name
    small nucleolar RNA, C/D box 61
  • Synonyms
    MBII-342, Rnu61, U61
  • Feature Type
    snoRNA gene
  • IDs
    MGI:2148805
    NCBI Gene: 353374
  • Alliance
    gene page
Location &
Maps
more
  • Sequence Map
    ChrX:56436808-56436869 bp, - strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome X, 31.66 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    11 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2148805
 snoRNA gene ChrX:56436808-56436879 (-)
129S1/SvImJ MGP_129S1SvImJ_G0039579
 snoRNA gene ChrX:52725516-52725586 (-)
A/J MGP_AJ_G0039578
 snoRNA gene ChrX:52921604-52921674 (-)
AKR/J MGP_AKRJ_G0039504
 snoRNA gene ChrX:54320235-54320305 (-)
BALB/cJ MGP_BALBcJ_G0039556
 snoRNA gene ChrX:52361516-52361586 (-)
C3H/HeJ MGP_C3HHeJ_G0039216
 snoRNA gene ChrX:53258811-53258881 (-)
C57BL/6NJ MGP_C57BL6NJ_G0040108
 snoRNA gene ChrX:54112334-54112404 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0036752
 snoRNA gene ChrX:52316093-52316163 (-)
CAST/EiJ MGP_CASTEiJ_G0038342
 snoRNA gene ChrX:39147411-39147481 (-)
CBA/J MGP_CBAJ_G0039186
 snoRNA gene ChrX:55700206-55700276 (-)
DBA/2J MGP_DBA2J_G0039380
 snoRNA gene ChrX:52490416-52490486 (-)
FVB/NJ MGP_FVBNJ_G0039334
 snoRNA gene ChrX:52089904-52089974 (-)
LP/J MGP_LPJ_G0039419
 snoRNA gene ChrX:53305539-53305609 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0039336
 snoRNA gene ChrX:57243246-57243316 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0040205
 snoRNA gene ChrX:52748368-52748438 (-)
PWK/PhJ MGP_PWKPhJ_G0038021
 snoRNA gene ChrX:37410714-37410784 (-)
SPRET/EiJ MGP_SPRETEiJ_G0037773
 snoRNA gene ChrX:39900731-39900801 (-)
WSB/EiJ MGP_WSBEiJ_G0038571
 snoRNA gene ChrX:52291334-52291404 (-)



Homology
more
  • Human Ortholog
    SNORD61, small nucleolar RNA, C/D box 61
  • Vertebrate Orthologs
    1
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    SNORD61, small nucleolar RNA, C/D box 61
  • Synonyms
    HBII-342, RNU61, U61
  • Links
    NCBI Gene ID: 26787

  • Chr Location
    chrX:136879199-136879271 (-)  GRCh38
Gene Ontology
(GO)
Classifications
less
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
Sequences &
Gene Models
less
  • All Sequences
    23
  • RefSeq
    1
Representative SequencesLengthStrain/SpeciesFlank
genomic 353374 NCBI Gene Model | MGI Sequence Detail 62 C57BL/6J ±  kb
transcript NR_002903 RefSeq | MGI Sequence Detail 62 Not Specified  
For the selected sequence
Molecular
Reagents
less

  • Microarray probesets 1
References
more
  • Summaries
    All 9
  • Earliest
    J:69860 Huttenhofer A, et al., RNomics: an experimental approach that identifies 201 candidates for novel, small, non-messenger RNAs in mouse. EMBO J. 2001 Jun 1;20(11):2943-53
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
04/16/2024
MGI 6.23 		The Jackson Laboratory