About   Help   FAQ
B3gnt9 Gene Detail
Summary
  • Symbol
    B3gnt9
  • Name
    UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 9
  • Synonyms
    B3gnt9-ps
  • Feature Type
    protein coding gene
  • IDs
    MGI:2142841
    NCBI Gene: 97440
  • Alliance
    genome feature page
  • Transcription Start Sites
    1 TSS
Location &
Maps
more
  • Sequence Map
    Chr8:105979270-105981785 bp, - strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 8, 53.04 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    96 from dbSNP Build 142
  • Strain Annotations
    19
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2142841
 protein coding gene Chr8:105979270-105981895 (-)
129S1/SvImJ ENSMUSG00200014671
 protein coding gene Chr8:100258804-100261319 (-)
A/J ENSMUSG00195003445
 protein coding gene Chr8:100581299-100583814 (-)
AKR/J ENSMUSG00220011578
 protein coding gene Chr8:100715158-100717673 (-)
BALB/cJ ENSMUSG00180022113
 protein coding gene Chr8:100587052-100589567 (-)
C3H/HeJ ENSMUSG00175022286
 protein coding gene Chr8:100643842-100646357 (-)
C57BL/6NJ ENSMUSG00215001178
 protein coding gene Chr8:100258169-100260684 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0031466
 protein coding gene Chr8:96379190-96381679 (-)
CAST/EiJ ENSTCUG00005021540
 protein coding gene Chr8:100025056-100027571 (-)
CBA/J ENSMUSG00210032170
 protein coding gene Chr8:100571529-100574044 (-)
DBA/2J ENSMUSG00185005194
 protein coding gene Chr8:106680330-106682845 (-)
FVB/NJ ENSMUSG00205015582
 protein coding gene Chr8:99555798-99558313 (-)
JF1/MsJ ENSUMUG00000005904
 protein coding gene Chr8:109013526-109016041 (-)
LP/J ENSMUSG00230007064
 protein coding gene Chr8:110360737-110363252 (-)
NOD/ShiLtJ ENSMUSG00190021044
 protein coding gene Chr8:100710742-100713257 (-)
NZO/HlLtJ ENSMUSG00225018093
 protein coding gene Chr8:113711313-113713828 (-)
PWK/PhJ ENSLUMG00010003445
 protein coding gene Chr8:100493066-100495581 (-)
SPRET/EiJ ENSMSPG00010030054
 protein coding gene Chr8:102574540-102577039 (-)
WSB/EiJ ENSIUOG00005030938
 protein coding gene Chr8:101383419-101385934 (-)



Homology
more
  • Human Ortholog
    B3GNT9, UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 9
  • Vertebrate Orthologs
    3
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    B3GNT9, UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 9
  • Links
    NCBI Gene ID: 84752
    UniProt: Q6UX72

  • Chr Location
    16q22.1; chr16:67148104-67151260 (-)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    2 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    7
  • GO References
    3
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    597
  • cDNA Data
    11
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000069920 Ensembl Gene Model | MGI Sequence Detail 2516 C57BL/6J ±  kb
transcript ENSMUST00000093217 Ensembl | MGI Sequence Detail 2325 Not Applicable  
polypeptide ENSMUSP00000133023 Ensembl | MGI Sequence Detail 399 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 11
    cDNA 11

    Microarray probesets 1
Other
Accession IDs
less
MGI:2142840
References
more
  • Summaries
    All 22
    Gene Ontology 3
    Phenotypes 2
  • Earliest
    J:60984 Ko MS, et al., Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse development. Development. 2000 Apr;127(8):1737-49
  • Latest
    J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
Warranty Disclaimer, Privacy Notice, Licensing, & Copyright
Send questions and comments to User Support. 		last database update
09/01/2026
MGI 6.24 		The Jackson Laboratory