About   Help   FAQ
Hirip3 Gene Detail
Summary
  • Symbol
    Hirip3
  • Name
    HIRA interacting protein 3
  • Feature Type
    protein coding gene
  • IDs
    MGI:2142364
    NCBI Gene: 233876
  • Alliance
    gene page
  • Transcription Start Sites
    9 TSS
Location &
Maps
more
  • Sequence Map
    Chr7:126461155-126464549 bp, + strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 7, 69.25 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    21 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2142364
 protein coding gene Chr7:126461144-126464549 (+)
129S1/SvImJ MGP_129S1SvImJ_G0033005
 protein coding gene Chr7:131168373-131171778 (+)
A/J MGP_AJ_G0032988
 protein coding gene Chr7:127687804-127691209 (+)
AKR/J MGP_AKRJ_G0032920
 protein coding gene Chr7:130923103-130926508 (+)
BALB/cJ MGP_BALBcJ_G0032993
 protein coding gene Chr7:127351310-127354715 (+)
C3H/HeJ MGP_C3HHeJ_G0032703
 protein coding gene Chr7:130861263-130864668 (+)
C57BL/6NJ MGP_C57BL6NJ_G0033499
 protein coding gene Chr7:136268822-136272227 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0030471
 protein coding gene Chr7:128881482-128884977 (+)
CAST/EiJ MGP_CASTEiJ_G0032032
 protein coding gene Chr7:122647702-122650618 (+)
CBA/J MGP_CBAJ_G0032676
 protein coding gene Chr7:140857594-140860999 (+)
DBA/2J MGP_DBA2J_G0032828
 protein coding gene Chr7:125663360-125666765 (+)
FVB/NJ MGP_FVBNJ_G0032781
 protein coding gene Chr7:125514562-125517967 (+)
LP/J MGP_LPJ_G0032922
 protein coding gene Chr7:132634538-132637943 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0032813
 protein coding gene Chr7:142026422-142029827 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0033518
 protein coding gene Chr7:129932921-129937205 (+)
PWK/PhJ MGP_PWKPhJ_G0031739
 protein coding gene Chr7:118657846-118661251 (+)
SPRET/EiJ MGP_SPRETEiJ_G0031585
 protein coding gene Chr7:116778662-116782014 (+)
WSB/EiJ MGP_WSBEiJ_G0032144
 protein coding gene Chr7:130912099-130915506 (+)



Homology
more
  • Human Ortholog
    HIRIP3, HIRA interacting protein 3
  • Vertebrate Orthologs
    3
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    HIRIP3, HIRA interacting protein 3
  • Links
    NCBI Gene ID: 8479
    neXtProt AC: NX_Q9BW71
    UniProt: Q9BW71

  • Chr Location
    16p11.2; chr16:29992321-29996096 (-)  GRCh38
Human Diseases
less
  • References
    3 with disease annotations
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    9 phenotypes from 1 allele in 1 genetic background
    42 phenotype references
Phenotype Overview

adipose tissue
behavior/neurological
cardiovascular system
cellular
craniofacial
digestive/alimentary system
embryo
endocrine/exocrine glands
growth/size/body
hearing/vestibular/ear
hematopoietic system
homeostasis/metabolism
integument
immune system
limbs/digits/tail
liver/biliary system
mortality/aging
muscle
nervous system
pigmentation
renal/urinary system
reproductive system
respiratory system
skeleton
taste/olfaction
neoplasm
vision/eye

Click cells to view annotations.
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    7
  • GO References
    4
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    731
  • Tissues
    13
  • cDNA Data
    62
  • Literature Summary
    2
  • Comparison Matrix
    Gene Expression + Phenotype
    • Sequences &
    Gene Models
    less
    Representative SequencesLengthStrain/SpeciesFlank
    genomic 233876 NCBI Gene Model | MGI Sequence Detail 3395 C57BL/6J ±  kb
    transcript NM_001421797 RefSeq | MGI Sequence Detail 2303 C57BL/6  
    polypeptide Q8BLH7 UniProt | EBI | MGI Sequence Detail 601 Not Applicable  
    For the selected sequence
    Protein
    Information
    less
    Molecular
    Reagents
    less
    • All nucleic 62
      cDNA 62

      Microarray probesets 4
    References
    more
    • Summaries
      All 67
      Developmental Gene Expression 2
      Diseases 3
      Gene Ontology 4
      Phenotypes 42
    • Earliest
      J:289456 Magnaghi P, et al., HIRA, a mammalian homologue of Saccharomyces cerevisiae transcriptional co-repressors, interacts with Pax3. Nat Genet. 1998 Sep;20(1):74-7
    • Latest
      J:342026 Hasegawa Y, et al., Microglial cannabinoid receptor type 1 mediates social memory deficits in mice produced by adolescent THC exposure and 16p11.2 duplication. Nat Commun. 2023 Oct 25;14(1):6559
    Contributing Projects:
    Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
    Citing These Resources
    Funding Information
    Warranty Disclaimer, Privacy Notice, Licensing, & Copyright
    Send questions and comments to User Support.     		last database update
    04/16/2024
    MGI 6.23     		The Jackson Laboratory