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AU020206 Gene Detail
Summary
  • Symbol
    AU020206
  • Name
    expressed sequence AU020206
  • Feature Type
    lncRNA gene
  • IDs
    MGI:2142134
    NCBI Gene: 108167440
  • Alliance
    gene page
  • Transcription Start Sites
    15 TSS
Location &
Maps
more
  • Sequence Map
    Chr7:75418786-75431868 bp, - strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 7, 43.76 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    94 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2142134
 lncRNA gene Chr7:75418786-75431869 (-)
129S1/SvImJ MGP_129S1SvImJ_G0007218
 lincRNA gene Chr7:77444058-77457500 (-)
A/J MGP_AJ_G0007215
 lincRNA gene Chr7:75695563-75710355 (-)
AKR/J MGP_AKRJ_G0007185
 lincRNA gene Chr7:77307889-77323527 (-)
BALB/cJ MGP_BALBcJ_G0007193
 lincRNA gene Chr7:75439924-75454589 (-)
C3H/HeJ MGP_C3HHeJ_G0007137
 lincRNA gene Chr7:77991756-78006049 (-)
C57BL/6NJ MGP_C57BL6NJ_G0007363
 lincRNA gene Chr7:80606500-80620016 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0006571
 lincRNA gene Chr7:78499228-78512048 (-)
CAST/EiJ MGP_CASTEiJ_G0007039
 lincRNA gene Chr7:68893964-68909013 (-)
CBA/J MGP_CBAJ_G0007120
 lincRNA gene Chr7:83177139-83194215 (-)
DBA/2J MGP_DBA2J_G0007141
 lincRNA gene Chr7:74317863-74331170 (-)
FVB/NJ MGP_FVBNJ_G0007164
 lincRNA gene Chr7:74329461-74345487 (-)
LP/J MGP_LPJ_G0007223
 lincRNA gene Chr7:78687538-78701150 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0007140
 lincRNA gene Chr7:83319566-83334464 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0007366
 lincRNA gene Chr7:76755224-76770042 (-)
PWK/PhJ MGP_PWKPhJ_G0006982
 lincRNA gene Chr7:67507557-67521096 (-)
SPRET/EiJ MGP_SPRETEiJ_G0006890
 lincRNA gene Chr7:63853171-63866100 (-)
WSB/EiJ MGP_WSBEiJ_G0007100
 lincRNA gene Chr7:77101078-77113936 (-)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    16 phenotype references
  • All Mutations and Alleles
    65
  • Chemically induced (other)
    1
  • Gene trapped
    62
  • Radiation induced
    2
  • Genomic Mutations
    3 involving AU020206
  • Find Mice (IMSR)
    0 strains or lines available
Gene Ontology
(GO)
Classifications
less
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    8
Sequences &
Gene Models
less
  • All Sequences
    33
  • RefSeq
    1
Representative SequencesLengthStrain/SpeciesFlank
genomic 108167440 NCBI Gene Model | MGI Sequence Detail 13083 C57BL/6J ±  kb
transcript NR_165329 RefSeq | MGI Sequence Detail 1401 C57BL/6  
For the selected sequence
Molecular
Reagents
less
  • All nucleic 8
    cDNA 8

    Microarray probesets 2
References
more
  • Summaries
    All 29
    Phenotypes 16
  • Earliest
    J:88307 Giometti CS, et al., The analysis of recessive lethal mutations in mice by using two-dimensional gel electrophoresis of liver proteins. Mutat Res. 1990 Sep;242(1):47-55
  • Latest
    J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
04/16/2024
MGI 6.23 		The Jackson Laboratory