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Ssx2ip Gene Detail
Summary
  • Symbol
    Ssx2ip
  • Name
    SSX family member 2 interacting protein
  • Synonyms
    Adip
  • Feature Type
    protein coding gene
  • IDs
    MGI:2139150
    NCBI Gene: 99167
  • Alliance
    gene page
  • Transcription Start Sites
    5 TSS
Location &
Maps
more
  • Sequence Map
    Chr3:146110397-146145899 bp, + strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 3, 71.03 cM
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    357 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2139150
 protein coding gene Chr3:146110397-146145899 (+)
129S1/SvImJ MGP_129S1SvImJ_G0027970
 protein coding gene Chr3:149913928-149955729 (+)
A/J MGP_AJ_G0027929
 protein coding gene Chr3:144531087-144569190 (+)
AKR/J MGP_AKRJ_G0027895
 protein coding gene Chr3:148395138-148430971 (+)
BALB/cJ MGP_BALBcJ_G0027941
 protein coding gene Chr3:144359402-144394754 (+)
C3H/HeJ MGP_C3HHeJ_G0027671
 protein coding gene Chr3:148756576-148796345 (+)
C57BL/6NJ MGP_C57BL6NJ_G0028384
 protein coding gene Chr3:154941002-154979750 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0025722
 protein coding gene Chr3:139597643-139633724 (+)
CAST/EiJ MGP_CASTEiJ_G0027124
 protein coding gene Chr3:148736384-148772259 (+)
CBA/J MGP_CBAJ_G0027646
 protein coding gene Chr3:160442499-160486254 (+)
DBA/2J MGP_DBA2J_G0027786
 protein coding gene Chr3:143685328-143721018 (+)
FVB/NJ MGP_FVBNJ_G0027753
 protein coding gene Chr3:141102967-141139493 (+)
LP/J MGP_LPJ_G0027897
 protein coding gene Chr3:151291702-151329637 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0027786
 protein coding gene Chr3:168720856-168760066 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0028443
 protein coding gene Chr3:147977111-148014859 (+)
PWK/PhJ MGP_PWKPhJ_G0026847
 protein coding gene Chr3:143540158-143576778 (+)
SPRET/EiJ MGP_SPRETEiJ_G0026675
 protein coding gene Chr3:146145883-146181700 (+)
WSB/EiJ MGP_WSBEiJ_G0027204
 protein coding gene Chr3:148947605-148985671 (+)



Homology
more
  • Human Ortholog
    SSX2IP, SSX family member 2 interacting protein
  • Vertebrate Orthologs
    3
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    SSX2IP, SSX family member 2 interacting protein
  • Synonyms
    ADIP, hMsd1
  • Links
    NCBI Gene ID: 117178
    neXtProt AC: NX_Q9Y2D8
    UniProt: Q9Y2D8

  • Chr Location
    1p22.3; chr1:84643706-84690803 (-)  GRCh38
Human Diseases
less
  • References
    1 with disease annotations
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    1 phenotype from 1 allele in 1 genetic background
    8 phenotype references
Phenotype Overview

adipose tissue
behavior/neurological
cardiovascular system
cellular
craniofacial
digestive/alimentary system
embryo
endocrine/exocrine glands
growth/size/body
hearing/vestibular/ear
hematopoietic system
homeostasis/metabolism
integument
immune system
limbs/digits/tail
liver/biliary system
mortality/aging
muscle
nervous system
pigmentation
renal/urinary system
reproductive system
respiratory system
skeleton
taste/olfaction
neoplasm
vision/eye

Click cells to view annotations.
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    30
  • GO References
    11
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    11
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 99167 NCBI Gene Model | MGI Sequence Detail 35503 C57BL/6J ±  kb
transcript NM_001411104 RefSeq | MGI Sequence Detail 3701 C57BL/6  
polypeptide Q8VC66 UniProt | EBI | MGI Sequence Detail 615 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 11
    cDNA 11

    Microarray probesets 7
Other
Accession IDs
less
MGI:2139910
References
more
  • Summaries
    All 39
    Diseases 1
    Gene Ontology 11
    Phenotypes 8
  • Earliest
    J:60984 Ko MS, et al., Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse development. Development. 2000 Apr;127(8):1737-49
  • Latest
    J:336347 Wang B, et al., OCRL regulates lysosome positioning and mTORC1 activity through SSX2IP-mediated microtubule anchoring. EMBO Rep. 2021 May 13;:e52173
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
04/09/2024
MGI 6.23 		The Jackson Laboratory