Gene Expression Data
Assay Details
Assay
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Reference:
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J:31212
Shimamura K, et al., Longitudinal organization of the anterior neural plate and neural tube. Development. 1995 Dec;121(12):3923-33
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Assay type:
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RNA in situ
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MGI Accession ID:
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MGI:1934636
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Gene symbol:
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Nkx2-2
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Gene name:
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NK2 homeobox 2
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Probe:
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Nkx-2.2 probe
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Probe preparation:
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Antisense labelled with digoxigenin RNA
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Results
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Specimen
3A:
embryonic day 8.0
(more )
Note: 2 somites.
Specimen
3A:
(close )
Genetic Background:
|
Not Specified
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Age:
|
embryonic day 8.0
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Age Note:
|
Age of embryo at noon of plug day not specified in reference.
|
Sex:
|
Not Specified
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Type:
|
whole mount
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Fixation:
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4% Paraformaldehyde
|
Note:
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2 somites.
|
Structure |
Level |
Pattern |
Image |
Note |
TS12: future brain |
Present |
Regionally restricted |
3A
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Expression begins in front of the head process and extends near to the anterior edge of the neural plate.
|
Specimen
3B:
embryonic day 8.5
(more )
Note: 8 somites.
Specimen
3B:
(close )
Genetic Background:
|
Not Specified
|
Age:
|
embryonic day 8.5
|
Age Note:
|
Age of embryo at noon of plug day not specified in reference.
|
Sex:
|
Not Specified
|
Type:
|
whole mount
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Fixation:
|
4% Paraformaldehyde
|
Note:
|
8 somites.
|
Structure |
Level |
Pattern |
Image |
Note |
TS12: future brain |
Present |
Regionally restricted |
3B
|
Bilateral stripes of expression cross the midline and posteriorly end at the presumptive zona limitans.
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Specimen
3D:
embryonic day 8.5
(more )
Note: 11 somites.
Specimen
3D:
(close )
Genetic Background:
|
Not Specified
|
Age:
|
embryonic day 8.5
|
Age Note:
|
Age of embryo at noon of plug day not specified in reference.
|
Sex:
|
Not Specified
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Type:
|
whole mount
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Fixation:
|
4% Paraformaldehyde
|
Note:
|
11 somites.
|
Structure |
Level |
Pattern |
Image |
Note |
TS13: future hindbrain |
Present |
Regionally restricted |
3D
|
Separate domains of expression are present in the forebrain, midbrain/posterior diencephalon, hindbrain, and anterior spinal cord.
|
TS13: future midbrain |
Present |
Regionally restricted |
3D
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Separate domains of expression are present in the forebrain, midbrain/posterior diencephalon, hindbrain, and anterior spinal cord.
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TS13: future prosencephalon |
Present |
Regionally restricted |
3D
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Separate domains of expression are present in the forebrain, midbrain/posterior diencephalon, hindbrain, and anterior spinal cord.
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TS13: future spinal cord |
Present |
Regionally restricted |
3D
|
Separate domains of expression are present in the forebrain, midbrain/posterior diencephalon, hindbrain, and anterior spinal cord.
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Specimen
3G:
embryonic day 10.0
(more )
Note: Double labeled: purple - Nkx2-2; brown - Shh (assay MGI:1934638).
Specimen
3G:
(close )
Genetic Background:
|
Not Specified
|
Age:
|
embryonic day 10.0
|
Age Note:
|
Age of embryo at noon of plug day not specified in reference.
|
Sex:
|
Not Specified
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Type:
|
whole mount
|
Fixation:
|
4% Paraformaldehyde
|
Note:
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Double labeled: purple - Nkx2-2; brown - Shh (assay MGI:1934638).
|
Structure |
Level |
Pattern |
Image |
Note |
TS16: central nervous system |
Present |
|
3G
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Expression in a stripe along the entire anterior-posterior extent of the central nervous system.
|
TS16: future brain |
Present |
Regionally restricted |
3G
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Expression has a dorsal deflection at the zona limitans. Expression crosses the midline just ventral to the optic stalk. Anterior to the isthmus the expression extends to the front of the brain in a more dorsal position.
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TS16: future hindbrain |
Present |
Regionally restricted |
3G
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Expression has dorsal deflections at the interrhombomeric boundaries.
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Specimen
3H:
embryonic day 11.5
(more )
Note: Double labeled: purple - Nkx2-2; brown - Shh (assay MGI:1934638).
Specimen
3H:
(close )
Genetic Background:
|
Not Specified
|
Age:
|
embryonic day 11.5
|
Age Note:
|
Age of embryo at noon of plug day not specified in reference.
|
Sex:
|
Not Specified
|
Type:
|
whole mount
|
Fixation:
|
4% Paraformaldehyde
|
Note:
|
Double labeled: purple - Nkx2-2; brown - Shh (assay MGI:1934638).
|
Structure |
Level |
Pattern |
Image |
Note |
TS19: brain |
Present |
Regionally restricted |
3H
|
Expression has a dorsal deflection at the zona limitans. Expression crosses the midline just ventral to the optic stalk.
|
Specimen
3I:
embryonic day 11.5
(more )
Note: Double labeled: purple - Nkx2-2; brown - Shh (assay MGI:1934638).
Specimen
3I:
(close )
Genetic Background:
|
Not Specified
|
Age:
|
embryonic day 11.5
|
Age Note:
|
Age of embryo at noon of plug day not specified in reference.
|
Sex:
|
Not Specified
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Type:
|
section
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Fixation:
|
4% Paraformaldehyde
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Embedding:
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Paraffin
|
Note:
|
Double labeled: purple - Nkx2-2; brown - Shh (assay MGI:1934638).
|
Structure |
Level |
Pattern |
Image |
Note |
TS19: forebrain |
Present |
Regionally restricted |
3I
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Expression at the level of the postoptic forebrain.
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Specimen
3J:
embryonic day 11.5
(more )
Note: Double labeled: purple - Nkx2-2; brown - Shh (assay MGI:1934638).
Specimen
3J:
(close )
Genetic Background:
|
Not Specified
|
Age:
|
embryonic day 11.5
|
Age Note:
|
Age of embryo at noon of plug day not specified in reference.
|
Sex:
|
Not Specified
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Type:
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section
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Fixation:
|
4% Paraformaldehyde
|
Embedding:
|
Paraffin
|
Note:
|
Double labeled: purple - Nkx2-2; brown - Shh (assay MGI:1934638).
|
Structure |
Level |
Pattern |
Image |
Note |
TS19: diencephalon |
Present |
Regionally restricted |
3J
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Expression in the caudal diencephalon.
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Specimen
3K:
embryonic day 11.5
(more )
Note: Double labeled: purple - Nkx2-2; brown - Shh (assay MGI:1934638).
Specimen
3K:
(close )
Genetic Background:
|
Not Specified
|
Age:
|
embryonic day 11.5
|
Age Note:
|
Age of embryo at noon of plug day not specified in reference.
|
Sex:
|
Not Specified
|
Type:
|
section
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Fixation:
|
4% Paraformaldehyde
|
Embedding:
|
Paraffin
|
Note:
|
Double labeled: purple - Nkx2-2; brown - Shh (assay MGI:1934638).
|
Structure |
Level |
Pattern |
Image |
Note |
TS19: future spinal cord |
Present |
|
3K
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Expression in the paramedian plate cells. Posterior to the isthmus expression is in paramedian stripes that separate the floor plate from the longitudinal columns of motor neurons.
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TS19: hindbrain |
Present |
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3K
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Expression in the paramedian plate cells. Posterior to the isthmus expression is in paramedian stripes that separate the floor plate from the longitudinal columns of motor neurons.
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Specimen
4A:
embryonic day 10.5
(more )
Note: Double labeled: purple - Nkx2-2; brown - Ctnna2 (assay MGI:1934641).
Specimen
4A:
(close )
Genetic Background:
|
Not Specified
|
Age:
|
embryonic day 10.5
|
Age Note:
|
Age of embryo at noon of plug day not specified in reference.
|
Sex:
|
Not Specified
|
Type:
|
whole mount
|
Fixation:
|
4% Paraformaldehyde
|
Note:
|
Double labeled: purple - Nkx2-2; brown - Ctnna2 (assay MGI:1934641).
|
Structure |
Level |
Pattern |
Image |
Note |
TS17: brain |
Present |
|
4A
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The expression stripe is dorsal to the oculomotor nucleus and midbrain tegmentum.
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Specimen
4B:
embryonic day 10.5
(more )
Note: Double labeled: purple - Nkx2-2; brown - Ctnna2 (assay MGI:1934641).
Specimen
4B:
(close )
Genetic Background:
|
Not Specified
|
Age:
|
embryonic day 10.5
|
Age Note:
|
Age of embryo at noon of plug day not specified in reference.
|
Sex:
|
Not Specified
|
Type:
|
section from whole mount
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Fixation:
|
4% Paraformaldehyde
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Embedding:
|
Paraffin
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Note:
|
Double labeled: purple - Nkx2-2; brown - Ctnna2 (assay MGI:1934641).
|
Specimen
4C:
embryonic day 10.5
(more )
Note: Double labeled: purple - Nkx2-2; brown - Ctnna2 (assay MGI:1934641).
Specimen
4C:
(close )
Genetic Background:
|
Not Specified
|
Age:
|
embryonic day 10.5
|
Age Note:
|
Age of embryo at noon of plug day not specified in reference.
|
Sex:
|
Not Specified
|
Type:
|
section from whole mount
|
Fixation:
|
4% Paraformaldehyde
|
Embedding:
|
Paraffin
|
Note:
|
Double labeled: purple - Nkx2-2; brown - Ctnna2 (assay MGI:1934641).
|
Specimen
4D:
embryonic day 10.5
(more )
Note: Double labeled: purple - Nkx2-2; brown - Ctnna2 (assay MGI:1934641).
Specimen
4D:
(close )
Genetic Background:
|
Not Specified
|
Age:
|
embryonic day 10.5
|
Age Note:
|
Age of embryo at noon of plug day not specified in reference.
|
Sex:
|
Not Specified
|
Type:
|
section from whole mount
|
Fixation:
|
4% Paraformaldehyde
|
Embedding:
|
Paraffin
|
Note:
|
Double labeled: purple - Nkx2-2; brown - Ctnna2 (assay MGI:1934641).
|
Specimen
4E:
embryonic day 10.5
(more )
Note: Double labeled: purple - Nkx2-2; brown - Ctnna2 (assay MGI:1934641).
Specimen
4E:
(close )
Genetic Background:
|
Not Specified
|
Age:
|
embryonic day 10.5
|
Age Note:
|
Age of embryo at noon of plug day not specified in reference.
|
Sex:
|
Not Specified
|
Type:
|
section from whole mount
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Fixation:
|
4% Paraformaldehyde
|
Embedding:
|
Paraffin
|
Note:
|
Double labeled: purple - Nkx2-2; brown - Ctnna2 (assay MGI:1934641).
|
Specimen
5C:
embryonic day 9.5-9.75
(more )
Note: Double labeled: purple - Nkx2-2; brown - Ctnna2 (assay MGI:1934641).
Specimen
5C:
(close )
Genetic Background:
|
Not Specified
|
Age:
|
embryonic day 9.5-9.75
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Age Note:
|
Age of embryo at noon of plug day not specified in reference.
|
Sex:
|
Not Specified
|
Type:
|
whole mount
|
Fixation:
|
4% Paraformaldehyde
|
Note:
|
Double labeled: purple - Nkx2-2; brown - Ctnna2 (assay MGI:1934641).
|
|