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Ntng1 Gene Detail
Summary
  • Symbol
    Ntng1
  • Name
    netrin G1
  • Synonyms
    A930010C08Rik, Lmnt1
  • Feature Type
    protein coding gene
  • IDs
    MGI:1934028
    NCBI Gene: 80883
  • Alliance
    genome feature page
  • Transcription Start Sites
    10 TSS
Location &
Maps
more
  • Sequence Map
    Chr3:109687356-110051327 bp, - strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 3, 48.47 cM, cytoband G1
  • Mapping Data
    3 experiments
Strain
Comparison
more
  • SNPs within 2kb
    8860 from dbSNP Build 142
  • Strain Annotations
    31
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1934028
 protein coding gene Chr3:109687356-110057291 (-)
129S1/SvImJ ENSMUSG00200034241
 protein coding gene Chr3:106308663-106665884 (-)
129S1/SvImJ ENSMUSG00200034372
 protein coding gene Chr3:106666094-106666420 (-)
A/J ENSMUSG00195024936
 protein coding gene Chr3:107090668-107090994 (-)
A/J ENSMUSG00195024907
 protein coding gene Chr3:106733158-107090458 (-)
AKR/J ENSMUSG00220028718
 protein coding gene Chr3:105101316-105458515 (-)
AKR/J ENSMUSG00220028873
 protein coding gene Chr3:105458725-105459051 (-)
BALB/cJ ENSMUSG00180015345
 protein coding gene Chr3:106684145-107041496 (-)
BALB/cJ ENSMUSG00180015391
 protein coding gene Chr3:107041706-107042032 (-)
C3H/HeJ ENSMUSG00175026222
 protein coding gene Chr3:106594218-106594544 (-)
C3H/HeJ ENSMUSG00175026162
 protein coding gene Chr3:106213009-106594008 (-)
C57BL/6NJ ENSMUSG00215018494
 protein coding gene Chr3:106961100-107325632 (-)
C57BL/6NJ ENSMUSG00215018946
 protein coding gene Chr3:107325842-107326168 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0025549
 protein coding gene Chr3:103939794-104283667 (-)
CAST/EiJ ENSTCUG00005024760
 protein coding gene Chr3:107198184-107550563 (-)
CBA/J ENSMUSG00210008510
 protein coding gene Chr3:107192333-107192659 (-)
CBA/J ENSMUSG00210008466
 protein coding gene Chr3:106834896-107192123 (-)
DBA/2J ENSMUSG00185020304
 protein coding gene Chr3:107666313-107666639 (-)
DBA/2J ENSMUSG00185020258
 protein coding gene Chr3:107308778-107666103 (-)
FVB/NJ ENSMUSG00205020478
 protein coding gene Chr3:106216458-106216784 (-)
FVB/NJ ENSMUSG00205020041
 protein coding gene Chr3:105858922-106216248 (-)
JF1/MsJ ENSUMUG00000003139
 protein coding gene Chr3:106278022-106636919 (-)
LP/J ENSMUSG00230018253
 protein coding gene Chr3:109219550-109576795 (-)
LP/J ENSMUSG00230018318
 protein coding gene Chr3:109577005-109577331 (-)
NOD/ShiLtJ ENSMUSG00190030815
 protein coding gene Chr3:107906686-107907012 (-)
NOD/ShiLtJ ENSMUSG00190030503
 protein coding gene Chr3:107549216-107906476 (-)
NZO/HlLtJ ENSMUSG00225018159
 protein coding gene Chr3:112085412-112085738 (-)
NZO/HlLtJ ENSMUSG00225017990
 protein coding gene Chr3:111727971-112085202 (-)
PWK/PhJ ENSLUMG00010022230
 protein coding gene Chr3:106156289-106514723 (-)
SPRET/EiJ ENSMSPG00010030702
 protein coding gene Chr3:106693202-107038939 (-)
WSB/EiJ ENSIUOG00005004153
 protein coding gene Chr3:106852717-107216626 (-)



Homology
more
  • Human Ortholog
    NTNG1, netrin G1
  • Vertebrate Orthologs
    3
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    NTNG1, netrin G1
  • Synonyms
    Lmnt1, NetG1, NetrinG1
  • Links
    NCBI Gene ID: 22854
    UniProt: Q9Y2I2

  • Chr Location
    1p13.3; chr1:107140007-107484923 (+)  GRCh38
Human Diseases
less
  • References
    1 with disease annotations
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    2 phenotypes from 1 allele in 1 genetic background
    26 phenotype references
Mice homozygous for a null allele survive into adulthood with no major alterations in gross brain cytoarchitecture or axonal projection.
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    33
  • GO References
    11
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    723
  • Tissues
    58
  • cDNA Data
    14
  • Literature Summary
    42
Sequences &
Gene Models
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Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000059857 Ensembl Gene Model | MGI Sequence Detail 363972 C57BL/6J ±  kb
transcript ENSMUST00000072596 Ensembl | MGI Sequence Detail 1620 Not Applicable  
polypeptide ENSMUSP00000072397 Ensembl | MGI Sequence Detail 539 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 16
    cDNA 14
    Primer pair 1
    Other 1
    Antibodies 2

    Microarray probesets 6
Other
Accession IDs
less
MGI:1925193, MGI:2139833
References
more
  • Summaries
    All 100
    Developmental Gene Expression 42
    Diseases 1
    Gene Ontology 11
    Phenotypes 26
  • Earliest
    J:64213 Nakashiba T, et al., Netrin-G1: a novel glycosyl phosphatidylinositol-linked mammalian netrin that is functionally divergent from classical netrins. J Neurosci. 2000 Sep 1;20(17):6540-50
  • Latest
    J:377851 Bastille I, et al., Combinatorial transcriptional regulation establishes subtype-appropriate synaptic properties in auditory neurons. Cell Rep. 2025 Jun 24;44(6):115796
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
09/01/2026
MGI 6.24 		The Jackson Laboratory