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Efcab11 Gene Detail
Summary
  • Symbol
    Efcab11
  • Name
    EF-hand calcium binding domain 11
  • Synonyms
    2610021K21Rik, 2610110A13Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:1926017
    NCBI Gene: 78767
  • Alliance
    gene page
  • Transcription Start Sites
    3 TSS
Location &
Maps
more
  • Sequence Map
    Chr12:99683790-99849701 bp, - strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 12, 50.25 cM, cytoband F1
  • Mapping Data
    3 experiments
Strain
Comparison
more
  • SNPs within 2kb
    1425 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1926017
 protein coding gene Chr12:99659304-99850698 (-)
129S1/SvImJ MGP_129S1SvImJ_G0020012
 protein coding gene Chr12:101165277-101335789 (-)
A/J MGP_AJ_G0019967
 protein coding gene Chr12:97364875-97530225 (-)
AKR/J MGP_AKRJ_G0019943
 protein coding gene Chr12:99993948-100159571 (-)
BALB/cJ MGP_BALBcJ_G0019953
 protein coding gene Chr12:97708860-97868574 (-)
C3H/HeJ MGP_C3HHeJ_G0019755
 protein coding gene Chr12:100532424-100700633 (-)
C57BL/6NJ MGP_C57BL6NJ_G0020402
 protein coding gene Chr12:104283110-104453931 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0018016
 protein coding gene Chr12:94328278-94497548 (-)
CAST/EiJ MGP_CASTEiJ_G0019301
 protein coding gene Chr12:95630439-95798723 (-)
CBA/J MGP_CBAJ_G0019727
 protein coding gene Chr12:108160853-108330544 (-)
DBA/2J MGP_DBA2J_G0019838
 protein coding gene Chr12:96792385-96961156 (-)
FVB/NJ MGP_FVBNJ_G0019827
 protein coding gene Chr12:95508456-95675782 (-)
LP/J MGP_LPJ_G0019914
 protein coding gene Chr12:100998563-101161981 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0019869
 protein coding gene Chr12:111778161-111947725 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0020431
 protein coding gene Chr12:99554946-99724388 (-)
PWK/PhJ MGP_PWKPhJ_G0019065
 protein coding gene Chr12:91423096-91588550 (-)
SPRET/EiJ MGP_SPRETEiJ_G0018861
 protein coding gene Chr12:93731220-93901743 (-)
WSB/EiJ MGP_WSBEiJ_G0019355
 protein coding gene Chr12:100403572-100580923 (-)



Homology
more
  • Human Ortholog
    EFCAB11, EF-hand calcium binding domain 11
  • Vertebrate Orthologs
    3
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    EFCAB11, EF-hand calcium binding domain 11
  • Synonyms
    C14orf143
  • Links
    NCBI Gene ID: 90141
    neXtProt AC: NX_Q9BUY7
    UniProt: Q9BUY7

  • Chr Location
    14q32.11; chr14:89794669-89954777 (-)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    9 phenotype references
  • All Mutations and Alleles
    9
  • Chemically induced (other)
    1
  • Gene trapped
    5
  • Targeted
    3
  • Genomic Mutations
    1 involving Efcab11
  • Incidental Mutations
    APF
  • Find Mice (IMSR)
    13 strains or lines available
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    3
  • GO References
    2
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    714
  • Tissues
    6
  • cDNA Data
    20
  • Literature Summary
    1
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 78767 NCBI Gene Model | MGI Sequence Detail 165912 C57BL/6J ±  kb
transcript NM_030172 RefSeq | MGI Sequence Detail 2069 C57BL/6  
polypeptide Q9D0E5 UniProt | EBI | MGI Sequence Detail 162 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 20
    cDNA 20

    Microarray probesets 6
Other
Accession IDs
less
MGI:1917697
References
more
  • Summaries
    All 31
    Developmental Gene Expression 1
    Gene Ontology 2
    Phenotypes 9
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:236599 Dickinson ME, et al., High-throughput discovery of novel developmental phenotypes. Nature. 2016 Sep 14;537(7621):508-514
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
04/16/2024
MGI 6.23 		The Jackson Laboratory