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1700063D05Rik Gene Detail
Summary
  • Symbol
    1700063D05Rik
  • Name
    RIKEN cDNA 1700063D05 gene
  • Feature Type
    lncRNA gene
  • IDs
    MGI:1925750
    NCBI Gene: 78500
  • Alliance
    gene page
  • Transcription Start Sites
    4 TSS
Location &
Maps
more
  • Sequence Map
    Chr9:41117451-41128923 bp, + strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 9, 22.47 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    183 from dbSNP Build 142
  • Strain Annotations
    17
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1925750
 lncRNA gene Chr9:41103742-41129286 (+)
129S1/SvImJ MGP_129S1SvImJ_G0007426
 lincRNA gene Chr9:39460585-39482395 (+)
A/J MGP_AJ_G0007421
 lincRNA gene Chr9:38444755-38466247 (+)
AKR/J MGP_AKRJ_G0007394
 lincRNA gene Chr9:39167915-39189311 (+)
BALB/cJ MGP_BALBcJ_G0007399
 lincRNA gene Chr9:38191061-38210257 (+)
C3H/HeJ MGP_C3HHeJ_G0007343
 lincRNA gene Chr9:39696725-39715766 (+)
C57BL/6NJ no annotation
CAROLI/EiJ MGP_CAROLIEiJ_G0006760
 lincRNA gene Chr9:38069151-38092045 (+)
CAST/EiJ MGP_CASTEiJ_G0007247
 lincRNA gene Chr9:39428212-39590933 (+)
CBA/J MGP_CBAJ_G0007325
 lincRNA gene Chr9:42120567-42142316 (+)
DBA/2J MGP_DBA2J_G0007349
 lincRNA gene Chr9:38376970-38396466 (+)
FVB/NJ MGP_FVBNJ_G0007367
 lincRNA gene Chr9:37604914-37629078 (+)
LP/J MGP_LPJ_G0007431
 lincRNA gene Chr9:39736396-39760950 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0007347
 lincRNA gene Chr9:44162030-44185134 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0007574
 lincRNA gene Chr9:39097486-39116823 (+)
PWK/PhJ MGP_PWKPhJ_G0007188
 lincRNA gene Chr9:38192309-38204793 (+)
SPRET/EiJ MGP_SPRETEiJ_G0007093
 lincRNA gene Chr9:39332613-39356341 (+)
WSB/EiJ MGP_WSBEiJ_G0007307
 lincRNA gene Chr9:39122310-39144564 (+)



Homology
less
Gene Ontology
(GO)
Classifications
less
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    3
Sequences &
Gene Models
less
  • All Sequences
    31
  • RefSeq
    1
Representative SequencesLengthStrain/SpeciesFlank
genomic 78500 NCBI Gene Model | MGI Sequence Detail 11473 C57BL/6J ±  kb
transcript NR_040392 RefSeq | MGI Sequence Detail 709 C57BL/6  
For the selected sequence
Molecular
Reagents
less
  • All nucleic 3
    cDNA 3

    Microarray probesets 1
References
more
  • Summaries
    All 10
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:80000 The FANTOM Consortium and The RIKEN Genome Exploration Research Group Phase I & II Team, Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Nature. 2002;420:563-573
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
04/30/2024
MGI 6.23 		The Jackson Laboratory