Pate13 MGI Mouse Gene Detail - MGI:1925158 - prostate and testis expressed 13

Sequence Map

Chr9:35819719-35822092 bp, + strand
From NCBI annotation of GRCm39
View this region in JBrowse
Genome Browsers

Ensembl | UCSC | NCBI

For selected strains:

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_1925158	protein coding gene	Chr9:35819719-35822092 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0034547	protein coding gene	Chr9:33725926-33730588 (+)
A/J	MGP_AJ_G0034526	protein coding gene	Chr9:32867209-33029454 (+)
AKR/J	MGP_AKRJ_G0034453	protein coding gene	Chr9:34007967-34009057 (-)
BALB/cJ	MGP_BALBcJ_G0034516	protein coding gene	Chr9:32784256-32786970 (+)
C3H/HeJ	MGP_C3HHeJ_G0034230	protein coding gene	Chr9:34032902-34145404 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0035039	protein coding gene	Chr9:35262079-35269942 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	MGP_CASTEiJ_G0033551	protein coding gene	Chr9:33874404-33875646 (+)
CBA/J	MGP_CBAJ_G0034203	protein coding gene	Chr9:36448569-36474040 (-)
DBA/2J	MGP_DBA2J_G0034361	protein coding gene	Chr9:33317979-33324125 (-)
FVB/NJ	no annotation
LP/J	MGP_LPJ_G0034445	protein coding gene	Chr9:33988917-33991847 (+)
NOD/ShiLtJ	no annotation
NZO/HlLtJ	MGP_NZOHlLtJ_G0035057	protein coding gene	Chr9:33572354-33573553 (+)
PWK/PhJ	no annotation
SPRET/EiJ	no annotation
WSB/EiJ	no annotation

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Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.

Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.

Cellular Component

cell projection	cytoplasmic vesicle	cytoskeleton	cytosol	endoplasmic reticulum	endosome	extracellular region	Golgi apparatus	mitochondrion	non-membrane-bounded organelle	nucleus	organelle envelope	organelle lumen	plasma membrane	protein-containing complex	synapse	vacuole

Click cells to view annotations.

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Expression Overview

GXD's primary emphasis is on endogenous gene expression during development. Click on grid cells to view annotations.

Blue cells = expressed in wild-type.
Gray triangles = other expression annotations only
(e.g. absence of expression or data from mutants).

early conceptus	embryo ectoderm	embryo endoderm	embryo mesoderm	embryo mesenchyme	extraembryonic component	alimentary system	auditory system	branchial arches	cardiovascular system	connective tissue	endocrine system	exocrine system	hemolymphoid system	integumental system	limbs	liver and biliary system	musculoskeletal system	nervous system	olfactory system	reproductive system	respiratory system	urinary system	visual system

Click cells to view annotations.

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			Length	Strain/Species	Flank
genomic	77908	NCBI Gene Model \| MGI Sequence Detail	2374	C57BL/6J	± kb
transcript	NM_001378222	RefSeq \| MGI Sequence Detail	1694	C57BL/6
polypeptide	D3YWX3	UniProt \| EBI \| MGI Sequence Detail	137	Not Applicable

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Summaries

All 16

Gene Ontology 1

Phenotypes 1
Earliest

J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
Latest

J:279308 Fujihara Y, et al., Identification of multiple male reproductive tract-specific proteins that regulate sperm migration through the oviduct in mice. Proc Natl Acad Sci U S A. 2019 Sep 10;116(37):18498-18506

TSS for Pate13:

(View these features in JBrowse)

Contributing Projects: Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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