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Rbm12b2 Gene Detail
Summary
  • Symbol
    Rbm12b2
  • Name
    RNA binding motif protein 12 B2
  • Synonyms
    C430048L16Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:1924854
    NCBI Gene: 77604
  • Alliance
    gene page
  • Transcription Start Sites
    2 TSS
Location &
Maps
more
  • Sequence Map
    Chr4:12089439-12096243 bp, + strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 4, 5.58 cM
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    47 from dbSNP Build 142
  • Strain Annotations
    15
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1924854
 protein coding gene Chr4:12089370-12105618 (+)
129S1/SvImJ MGP_129S1SvImJ_G0028062
 protein coding gene Chr4:8791721-8799425 (+)
A/J MGP_AJ_G0028019
 protein coding gene Chr4:8645115-8658162 (+)
AKR/J MGP_AKRJ_G0027985
 protein coding gene Chr4:8815203-8826340 (+)
BALB/cJ MGP_BALBcJ_G0028031
 protein coding gene Chr4:8565587-8573795 (+)
C3H/HeJ MGP_C3HHeJ_G0027760
 protein coding gene Chr4:8912397-9013843 (+)
C57BL/6NJ no annotation
CAROLI/EiJ no annotation
CAST/EiJ MGP_CASTEiJ_G0027216
 protein coding gene Chr4:8810642-8821080 (+)
CBA/J no annotation
DBA/2J MGP_DBA2J_G0027877
 protein coding gene Chr4:8500963-8510337 (+)
FVB/NJ MGP_FVBNJ_G0027843
 protein coding gene Chr4:8341038-8348234 (+)
LP/J MGP_LPJ_G0027986
 protein coding gene Chr4:8885104-8890049 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0027876
 protein coding gene Chr4:9644120-9664328 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0028532
 protein coding gene Chr4:8743982-8756479 (+)
PWK/PhJ MGP_PWKPhJ_G0026936
 protein coding gene Chr4:8601882-8619369 (+)
SPRET/EiJ MGP_SPRETEiJ_G0026765
 protein coding gene Chr4:8669220-8685011 (+)
WSB/EiJ MGP_WSBEiJ_G0027293
 protein coding gene Chr4:8819669-8889918 (+)



Homology
more
  • Human Ortholog
    RBM12B, RNA binding motif protein 12B
  • Vertebrate Orthologs
    5
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    RBM12B, RNA binding motif protein 12B
  • Synonyms
    MGC:33837
  • Links
    NCBI Gene ID: 389677
    neXtProt AC: NX_Q8IXT5
    UniProt: Q8IXT5

  • Chr Location
    8q22.1; chr8:93728155-93741017 (-)  GRCh38
Human Diseases
less
  • References
    1 with disease annotations
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    7 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    4
  • GO References
    1
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    6
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000052137 Ensembl Gene Model | MGI Sequence Detail 6805 C57BL/6J ±  kb
transcript ENSMUST00000063839 Ensembl | MGI Sequence Detail 3327 Not Applicable  
polypeptide ENSMUSP00000066311 Ensembl | MGI Sequence Detail 834 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 6
    cDNA 6

    Microarray probesets 3
Other
Accession IDs
less
MGI:2140536
References
more
  • Summaries
    All 28
    Diseases 1
    Gene Ontology 1
    Phenotypes 7
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:282558 Collin GB, et al., Mouse Models of Inherited Retinal Degeneration with Photoreceptor Cell Loss. Cells. 2020 Apr 10;9(4):931
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
04/16/2024
MGI 6.23 		The Jackson Laboratory