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Wdr17 Gene Detail
Summary
  • Symbol
    Wdr17
  • Name
    WD repeat domain 17
  • Synonyms
    3010002I12Rik, B230207L18Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:1924662
    NCBI Gene: 244484
  • Alliance
    gene page
  • Transcription Start Sites
    4 TSS
Location &
Maps
more
  • Sequence Map
    Chr8:55082316-55180014 bp, - strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 8, 29.28 cM, cytoband B3.1
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    578 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1924662
 protein coding gene Chr8:55082090-55340219 (-)
129S1/SvImJ MGP_129S1SvImJ_G0033614
 protein coding gene Chr8:54287573-54538510 (-)
A/J MGP_AJ_G0033596
 protein coding gene Chr8:52007934-52251529 (-)
AKR/J MGP_AKRJ_G0033521
 protein coding gene Chr8:53485778-53751862 (-)
BALB/cJ MGP_BALBcJ_G0033593
 protein coding gene Chr8:52237440-52490790 (-)
C3H/HeJ MGP_C3HHeJ_G0033302
 protein coding gene Chr8:54185024-54444750 (-)
C57BL/6NJ MGP_C57BL6NJ_G0034109
 protein coding gene Chr8:56300246-56570710 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0031057
 protein coding gene Chr8:47833931-48066316 (-)
CAST/EiJ MGP_CASTEiJ_G0032628
 protein coding gene Chr8:53806014-54059235 (-)
CBA/J MGP_CBAJ_G0033281
 protein coding gene Chr8:58361496-58634519 (-)
DBA/2J MGP_DBA2J_G0033434
 protein coding gene Chr8:51805678-52058694 (-)
FVB/NJ MGP_FVBNJ_G0033375
 protein coding gene Chr8:51153372-51403926 (-)
LP/J MGP_LPJ_G0033522
 protein coding gene Chr8:54265183-54537042 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0033419
 protein coding gene Chr8:59588539-59960219 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0034127
 protein coding gene Chr8:53774445-54020934 (-)
PWK/PhJ MGP_PWKPhJ_G0032336
 protein coding gene Chr8:51342209-51586078 (-)
SPRET/EiJ MGP_SPRETEiJ_G0032172
 protein coding gene Chr8:52860548-53121009 (-)
WSB/EiJ MGP_WSBEiJ_G0032744
 protein coding gene Chr8:54017770-54274070 (-)



Homology
more
  • Human Ortholog
    WDR17, WD repeat domain 17
  • Vertebrate Orthologs
    3
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    WDR17, WD repeat domain 17
  • Links
    NCBI Gene ID: 116966
    neXtProt AC: NX_Q8IZU2
    UniProt: Q8IZU2

  • Chr Location
    4q34.2; chr4:176065841-176182818 (+)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    8 phenotype references
Gene Ontology
(GO)
Classifications
less
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    762
  • Tissues
    16
  • cDNA Data
    20
  • Literature Summary
    3
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 244484 NCBI Gene Model | MGI Sequence Detail 97699 C57BL/6J ±  kb
transcript NM_001372372 RefSeq | MGI Sequence Detail 6658 C57BL/6  
polypeptide NP_001359300 RefSeq | MGI Sequence Detail 1307 C57BL/6  
For the selected sequence
Protein
Information
less
  • UniProt
    10 Sequences
  • InterPro Domains
    IPR020472 G-protein beta WD-40 repeat
    IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily
    IPR001680 WD40 repeat
    IPR019775 WD40 repeat, conserved site
    IPR036322 WD40-repeat-containing domain superfamily
    IPR015943 WD40/YVTN repeat-like-containing domain superfamily
Molecular
Reagents
less
  • All nucleic 21
    cDNA 20
    Primer pair 1

    Microarray probesets 3
Other
Accession IDs
less
MGI:1919635
References
more
  • Summaries
    All 29
    Developmental Gene Expression 3
    Phenotypes 8
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:313619 Bedogni F, et al., Cell-Type-Specific Gene Expression in Developing Mouse Neocortex: Intermediate Progenitors Implicated in Axon Development. Front Mol Neurosci. 2021;14:686034
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
04/16/2024
MGI 6.23 		The Jackson Laboratory