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Rnf225 Gene Detail
Summary
  • Symbol
    Rnf225
  • Name
    ring finger protein 225
  • Synonyms
    2310014L17Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:1924198
    NCBI Gene: 381845
  • Alliance
    gene page
  • Transcription Start Sites
    11 TSS
Location &
Maps
more
  • Sequence Map
    Chr7:12661343-12664999 bp, + strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 7, 7.69 cM, cytoband A2
  • Mapping Data
    3 experiments
Strain
Comparison
more
  • SNPs within 2kb
    65 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1924198
 protein coding gene Chr7:12661343-12664999 (+)
129S1/SvImJ MGP_129S1SvImJ_G0031657
 protein coding gene Chr7:10325401-10329057 (+)
A/J MGP_AJ_G0031630
 protein coding gene Chr7:10171715-10175372 (+)
AKR/J MGP_AKRJ_G0031553
 protein coding gene Chr7:10401932-10405588 (+)
BALB/cJ MGP_BALBcJ_G0031635
 protein coding gene Chr7:10285271-10288928 (+)
C3H/HeJ MGP_C3HHeJ_G0031357
 protein coding gene Chr7:10494481-10498137 (+)
C57BL/6NJ MGP_C57BL6NJ_G0032099
 protein coding gene Chr7:10853185-10856841 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0029193
 protein coding gene Chr7:11770325-11774260 (+)
CAST/EiJ MGP_CASTEiJ_G0030715
 protein coding gene Chr7:8054492-8058148 (+)
CBA/J MGP_CBAJ_G0031314
 protein coding gene Chr7:11063724-11067380 (+)
DBA/2J MGP_DBA2J_G0031472
 protein coding gene Chr7:10051753-10055409 (+)
FVB/NJ MGP_FVBNJ_G0031428
 protein coding gene Chr7:10049064-10052714 (+)
LP/J MGP_LPJ_G0031559
 protein coding gene Chr7:10417327-10420983 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0031463
 protein coding gene Chr7:11152674-11156324 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0032129
 protein coding gene Chr7:10181359-10185015 (+)
PWK/PhJ MGP_PWKPhJ_G0030443
 protein coding gene Chr7:8539160-8542817 (+)
SPRET/EiJ MGP_SPRETEiJ_G0030269
 protein coding gene Chr7:6293668-6297326 (+)
WSB/EiJ MGP_WSBEiJ_G0030810
 protein coding gene Chr7:10202185-10205842 (+)



Homology
more
  • Human Ortholog
    RNF225, ring finger protein 225
  • Vertebrate Orthologs
    3
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    RNF225, ring finger protein 225
  • Links
    NCBI Gene ID: 646862
    neXtProt AC: NX_M0QZC1
    UniProt: M0QZC1

  • Chr Location
    19q13.43; chr19:58395656-58397079 (+)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    5 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    4
  • GO References
    3
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    737
  • Tissues
    12
  • cDNA Data
    20
  • Literature Summary
    1
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 381845 NCBI Gene Model | MGI Sequence Detail 3657 C57BL/6J ±  kb
transcript NM_029809 RefSeq | MGI Sequence Detail 3257 C57BL/6  
polypeptide Q9D7D1 UniProt | EBI | MGI Sequence Detail 332 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 20
    cDNA 20

    Microarray probesets 4
Other
Accession IDs
less
MGI:2142180, MGI:2142312
References
more
  • Summaries
    All 34
    Developmental Gene Expression 1
    Gene Ontology 3
    Phenotypes 5
  • Earliest
    J:60984 Ko MS, et al., Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse development. Development. 2000 Apr;127(8):1737-49
  • Latest
    J:228563 Koscielny G, et al., The International Mouse Phenotyping Consortium Web Portal, a unified point of access for knockout mice and related phenotyping data. Nucleic Acids Res. 2014 Jan;42(Database issue):D802-9
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
04/16/2024
MGI 6.23 		The Jackson Laboratory