About   Help   FAQ
1700121N20Rik Gene Detail
Summary
  • Symbol
    1700121N20Rik
  • Name
    RIKEN cDNA 1700121N20 gene
  • Feature Type
    lncRNA gene
  • IDs
    MGI:1923889
    NCBI Gene: 76639
  • Alliance
  • Transcription Start Sites
    1 TSS
Location &
Maps
more
  • Sequence Map
    Chr12:106408912-106413925 bp, - strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
  • Genetic Map
    Chromosome 12, 56.95 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    59 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1923889
lncRNA gene Chr12:106408911-106413925 (-)
129S1/SvImJ MGP_129S1SvImJ_G0005395
lincRNA gene Chr12:108418329-108427586 (-)
A/J MGP_AJ_G0005378
lincRNA gene Chr12:104329911-104335554 (-)
AKR/J MGP_AKRJ_G0005358
lincRNA gene Chr12:107375587-107382581 (-)
BALB/cJ MGP_BALBcJ_G0005360
lincRNA gene Chr12:104756176-104761576 (-)
C3H/HeJ MGP_C3HHeJ_G0005309
lincRNA gene Chr12:107811274-107817520 (-)
C57BL/6NJ MGP_C57BL6NJ_G0005514
lincRNA gene Chr12:111757916-111765558 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0004899
lincRNA gene Chr12:100911359-100916411 (-)
CAST/EiJ MGP_CASTEiJ_G0005253
lincRNA gene Chr12:102639632-102644736 (-)
CBA/J MGP_CBAJ_G0005298
lincRNA gene Chr12:116199647-116207255 (-)
DBA/2J MGP_DBA2J_G0005315
lincRNA gene Chr12:103849645-103856426 (-)
FVB/NJ MGP_FVBNJ_G0005341
lincRNA gene Chr12:102642165-102647093 (-)
LP/J MGP_LPJ_G0005397
lincRNA gene Chr12:108280547-108286605 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0005323
lincRNA gene Chr12:119524311-119530313 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0005515
lincRNA gene Chr12:106788918-106793840 (-)
PWK/PhJ MGP_PWKPhJ_G0005202
lincRNA gene Chr12:98450069-98455069 (-)
SPRET/EiJ MGP_SPRETEiJ_G0005123
lincRNA gene Chr12:100995478-101001310 (-)
WSB/EiJ MGP_WSBEiJ_G0005303
lincRNA gene Chr12:107728911-107734003 (-)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    2 phenotype references
Gene Ontology
(GO)
Classifications
less
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • cDNA Data
Sequences &
Gene Models
less
  • All Sequences
  • RefSeq
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000092066 Ensembl Gene Model | MGI Sequence Detail 5014 C57BL/6J ±  kb
transcript ENSMUST00000167922 Ensembl | MGI Sequence Detail 1027 Not Applicable  
For the selected sequence
Molecular
Reagents
less
  • All nucleic 1
    cDNA 1

    Microarray probesets 1
References
more
  • Summaries
    All 10
    Phenotypes 2
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:80000 The FANTOM Consortium and The RIKEN Genome Exploration Research Group Phase I & II Team, Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Nature. 2002;420:563-573

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
Warranty Disclaimer, Privacy Notice, Licensing, & Copyright
Send questions and comments to User Support.
last database update
03/19/2024
MGI 6.23
The Jackson Laboratory