About   Help   FAQ
Ankrd48 Gene Detail
Summary
  • Symbol
    Ankrd48
  • Name
    ankyrin repeat domain 48
  • Synonyms
    1700008J08Rik, 1700012M14Rik, Ankrd36, GC3
  • Feature Type
    protein coding gene
  • IDs
    MGI:1923639
    NCBI Gene: 76389
  • Alliance
    genome feature page
  • Transcription Start Sites
    6 TSS
Location &
Maps
more
  • Sequence Map
    Chr11:5519684-5639337 bp, + strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 11, 3.71 cM, cytoband A1
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    3429 from dbSNP Build 142
  • Strain Annotations
    19
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1923639
 protein coding gene Chr11:5519680-5639617 (+)
129S1/SvImJ ENSMUSG00200033303
 protein coding gene Chr11:2471707-2590812 (+)
A/J ENSMUSG00195021694
 protein coding gene Chr11:2378686-2504777 (+)
AKR/J ENSMUSG00220007932
 protein coding gene Chr11:2416142-2542235 (+)
BALB/cJ ENSMUSG00180023460
 protein coding gene Chr11:2402235-2528295 (+)
C3H/HeJ ENSMUSG00175009992
 protein coding gene Chr11:2398170-2517823 (+)
C57BL/6NJ ENSMUSG00215029754
 protein coding gene Chr11:2408745-2528395 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0016054
 protein coding gene Chr11:2423688-2546908 (+)
CAST/EiJ ENSTCUG00005037656
 protein coding gene Chr11:2480559-2607810 (+)
CBA/J ENSMUSG00210017806
 protein coding gene Chr11:2397777-2517428 (+)
DBA/2J ENSMUSG00185017066
 protein coding gene Chr11:2495582-2615230 (+)
FVB/NJ ENSMUSG00205024548
 protein coding gene Chr11:2381809-2501965 (+)
JF1/MsJ ENSUMUG00000031530
 protein coding gene Chr11:2653331-2771287 (+)
LP/J ENSMUSG00230033385
 protein coding gene Chr11:3554813-3680869 (+)
NOD/ShiLtJ ENSMUSG00190026543
 protein coding gene Chr11:2378252-2504333 (+)
NZO/HlLtJ ENSMUSG00225025929
 protein coding gene Chr11:5613473-5733627 (+)
PWK/PhJ ENSLUMG00010018598
 protein coding gene Chr11:2388315-2508143 (+)
SPRET/EiJ ENSMSPG00010007426
 protein coding gene Chr11:2460114-2576695 (+)
WSB/EiJ ENSIUOG00005007453
 protein coding gene Chr11:2401692-2527742 (+)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    4 phenotypes from 1 allele in 1 genetic background
    11 phenotype references
Phenotype Overview

adipose tissue
behavior/neurological
cardiovascular system
cellular
craniofacial
digestive/alimentary system
embryo
endocrine/exocrine glands
growth/size/body
hearing/vestibular/ear
hematopoietic system
homeostasis/metabolism
integument
immune system
limbs/digits/tail
liver/biliary system
mortality/aging
muscle
nervous system
pigmentation
renal/urinary system
reproductive system
respiratory system
skeleton
taste/olfaction
neoplasm
vision/eye

Click cells to view annotations.
Gene Ontology
(GO)
Classifications
less
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    597
  • cDNA Data
    15
  • Comparison Matrix
    Gene Expression + Phenotype
    • Sequences &
    Gene Models
    less
    Representative SequencesLengthStrain/SpeciesFlank
    genomic ENSMUSG00000020481 Ensembl Gene Model | MGI Sequence Detail 119654 C57BL/6J ±  kb
    transcript ENSMUST00000109856 Ensembl | MGI Sequence Detail 4491 Not Applicable  
    polypeptide ENSMUSP00000105482 Ensembl | MGI Sequence Detail 1415 Not Applicable  
    For the selected sequence
    Protein
    Information
    less
    • UniProt
      6 Sequences
    • InterPro Domains
      IPR002110 Ankyrin repeat
      IPR036770 Ankyrin repeat-containing domain superfamily
    Molecular
    Reagents
    less
    • All nucleic 16
      Genomic 1
      cDNA 15

      Microarray probesets 5
    Other
    Accession IDs
    less
    MGI:1919092, MGI:7620043
    References
    more
    • Summaries
      All 34
      Phenotypes 11
    • Earliest
      J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
    • Latest
      J:345621 Adams DJ, et al., Genetic determinants of micronucleus formation in vivo. Nature. 2024 Mar;627(8002):130-136
    Contributing Projects:
    Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
    Citing These Resources
    Funding Information
    Warranty Disclaimer, Privacy Notice, Licensing, & Copyright
    Send questions and comments to User Support.     		last database update
    09/01/2026
    MGI 6.24     		The Jackson Laboratory