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4930533B01Rik Gene Detail
Summary
  • Symbol
    4930533B01Rik
  • Name
    RIKEN cDNA 4930533B01 gene
  • Feature Type
    lncRNA gene
  • IDs
    MGI:1922416
    NCBI Gene: 75166
  • Alliance
  • Transcription Start Sites
    1 TSS
Location &
Maps
more
  • Sequence Map
    Chr2:113521398-113538895 bp, - strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
  • Genetic Map
    Chromosome 2, 57.41 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    97 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1922416
lncRNA gene Chr2:113521398-113538895 (-)
129S1/SvImJ MGP_129S1SvImJ_G0003616
antisense lncRNA gene Chr2:116166449-116183871 (-)
A/J MGP_AJ_G0003598
antisense lncRNA gene Chr2:111441694-111459808 (-)
AKR/J MGP_AKRJ_G0003576
antisense lncRNA gene Chr2:114541945-114559321 (-)
BALB/cJ MGP_BALBcJ_G0003587
antisense lncRNA gene Chr2:111673965-111692288 (-)
C3H/HeJ MGP_C3HHeJ_G0003534
antisense lncRNA gene Chr2:114962310-114982830 (-)
C57BL/6NJ MGP_C57BL6NJ_G0003726
antisense lncRNA gene Chr2:120014860-120033760 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0003234
antisense lncRNA gene Chr2:106608435-106626174 (-)
CAST/EiJ MGP_CASTEiJ_G0003497
antisense lncRNA gene Chr2:115257036-115277054 (-)
CBA/J MGP_CBAJ_G0003531
antisense lncRNA gene Chr2:124211107-124231524 (-)
DBA/2J MGP_DBA2J_G0003539
antisense lncRNA gene Chr2:110897099-110914710 (-)
FVB/NJ MGP_FVBNJ_G0003559
antisense lncRNA gene Chr2:109748484-109765795 (-)
LP/J MGP_LPJ_G0003616
antisense lncRNA gene Chr2:116474458-116491908 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0003547
antisense lncRNA gene Chr2:128601852-128620863 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0003727
antisense lncRNA gene Chr2:114616152-114634971 (-)
PWK/PhJ MGP_PWKPhJ_G0003452
antisense lncRNA gene Chr2:110407148-110425058 (-)
SPRET/EiJ MGP_SPRETEiJ_G0003395
antisense lncRNA gene Chr2:113771760-113789180 (-)
WSB/EiJ MGP_WSBEiJ_G0003531
antisense lncRNA gene Chr2:115440240-115460034 (-)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    3 phenotype references
  • All Mutations and Alleles
    2
  • Chemically induced (other)
    1
  • Radiation induced
    1
  • Genomic Mutations
    2 involving 4930533B01Rik
  • Find Mice (IMSR)
Gene Ontology
(GO)
Classifications
less
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • cDNA Data
Sequences &
Gene Models
less
  • All Sequences
  • RefSeq
Representative SequencesLengthStrain/SpeciesFlank
genomic 75166 NCBI Gene Model | MGI Sequence Detail 17498 C57BL/6J ±  kb
transcript NR_040614 RefSeq | MGI Sequence Detail 1029 C57BL/6  
For the selected sequence
Molecular
Reagents
less
  • All nucleic 1
    cDNA 1

    Microarray probesets 1
References
more
  • Summaries
    All 11
    Phenotypes 3
  • Earliest
    J:109968 Roderick TH, et al., Nineteen paracentric chromosomal inversions in mice. Genetics. 1974 Jan;76(1):109-17
  • Latest
    J:80000 The FANTOM Consortium and The RIKEN Genome Exploration Research Group Phase I & II Team, Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Nature. 2002;420:563-573

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Funding Information
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last database update
03/19/2024
MGI 6.23
The Jackson Laboratory