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Slc25a54 Gene Detail
Summary
  • Symbol
    Slc25a54
  • Name
    solute carrier family 25, member 54
  • Synonyms
    4930443G12Rik, SCaMC-1like
  • Feature Type
    protein coding gene
  • IDs
    MGI:1921936
    NCBI Gene: 74686
  • Alliance
    genome feature page
  • Transcription Start Sites
    1 TSS
Location &
Maps
more
  • Sequence Map
    Chr3:108987815-109023898 bp, + strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 3, 48.13 cM, cytoband G1
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    1123 from dbSNP Build 142
  • Strain Annotations
    19
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1921936
 protein coding gene Chr3:108987785-109024003 (+)
129S1/SvImJ ENSMUSG00200034379
 protein coding gene Chr3:105608647-105644870 (+)
A/J ENSMUSG00195025237
 protein coding gene Chr3:106035158-106071382 (+)
AKR/J ENSMUSG00220027470
 protein coding gene Chr3:104398875-104435104 (+)
BALB/cJ ENSMUSG00180016185
 protein coding gene Chr3:105979041-106015292 (+)
C3H/HeJ ENSMUSG00175025651
 protein coding gene Chr3:105515029-105551248 (+)
C57BL/6NJ ENSMUSG00215015688
 protein coding gene Chr3:106241811-106278051 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0025546
 protein coding gene Chr3:103270067-103303739 (+)
CAST/EiJ ENSTCUG00005025472
 protein coding gene Chr3:106508359-106550824 (+)
CBA/J ENSMUSG00210007349
 protein coding gene Chr3:106136957-106173178 (+)
DBA/2J ENSMUSG00185020928
 protein coding gene Chr3:106606412-106642632 (+)
FVB/NJ ENSMUSG00205021177
 protein coding gene Chr3:105173093-105209325 (+)
JF1/MsJ ENSUMUG00000002621
 protein coding gene Chr3:105580604-105616858 (+)
LP/J ENSMUSG00230013560
 protein coding gene Chr3:108521588-108557813 (+)
NOD/ShiLtJ ENSMUSG00190031747
 protein coding gene Chr3:106851240-106887469 (+)
NZO/HlLtJ ENSMUSG00225018849
 protein coding gene Chr3:111030005-111066226 (+)
PWK/PhJ ENSLUMG00010022596
 protein coding gene Chr3:105433301-105476011 (+)
SPRET/EiJ ENSMSPG00010027795
 protein coding gene Chr3:105959779-105996283 (+)
WSB/EiJ ENSIUOG00005004124
 protein coding gene Chr3:106160643-106196918 (+)



Homology
less
Human Diseases
less
  • References
    1 with disease annotations
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    7 phenotype references
  • All Mutations and Alleles
    4
  • Chemically induced (other)
    1
  • Endonuclease-mediated
    1
  • Radiation induced
    1
  • Targeted
    1
  • Genomic Mutations
    2 involving Slc25a54
  • Incidental Mutations
    APF
  • Find Mice (IMSR)
    35 strains or lines available
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    14
  • GO References
    7
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    597
  • cDNA Data
    3
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 74686 NCBI Gene Model | MGI Sequence Detail 36084 C57BL/6J ±  kb
transcript NM_029054 RefSeq | MGI Sequence Detail 1538 Not Specified  
polypeptide NP_083330 RefSeq | MGI Sequence Detail 473 Not Specified  
For the selected sequence
Protein
Information
less
  • UniProt
    4 Sequences
  • InterPro Domains
    IPR018247 EF-Hand 1, calcium-binding site
    IPR002048 EF-hand domain
    IPR011992 EF-hand domain pair
    IPR002067 Mitochondrial carrier protein
    IPR023395 Mitochondrial carrier protein domain superfamily
    IPR018108 Mitochondrial carrier protein, transmembrane region
Molecular
Reagents
less
  • All nucleic 3
    cDNA 3

    Microarray probesets 2
References
more
  • Summaries
    All 30
    Diseases 1
    Gene Ontology 7
    Phenotypes 7
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:302829 Lu J, et al., Mouse models for human hyperuricaemia: a critical review. Nat Rev Rheumatol. 2019 Jul;15(7):413-426
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
09/08/2026
MGI 6.24 		The Jackson Laboratory