1700071M16Rik MGI Mouse Gene Detail - MGI:1920754

Sequence Map

Chr17:43899231-43902400 bp, - strand
From NCBI annotation of GRCm39
View this region in JBrowse
Genome Browsers

Ensembl | UCSC | NCBI

For selected strains:

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_1920754	lncRNA gene	Chr17:43899231-43903333 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0003406	antisense lncRNA gene	Chr17:44486139-44490240 (-)
A/J	MGP_AJ_G0003384	antisense lncRNA gene	Chr17:43483839-43487940 (-)
AKR/J	MGP_AKRJ_G0003365	antisense lncRNA gene	Chr17:43724753-43728857 (-)
BALB/cJ	MGP_BALBcJ_G0003373	antisense lncRNA gene	Chr17:43375952-43380053 (-)
C3H/HeJ	MGP_C3HHeJ_G0003323	antisense lncRNA gene	Chr17:44421025-44425129 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0003513	antisense lncRNA gene	Chr17:46471795-46475897 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0003027	antisense lncRNA gene	Chr17:40309111-40313631 (-)
CAST/EiJ	MGP_CASTEiJ_G0003285	antisense lncRNA gene	Chr17:44456586-44460690 (-)
CBA/J	MGP_CBAJ_G0003319	antisense lncRNA gene	Chr17:48107479-48111583 (-)
DBA/2J	MGP_DBA2J_G0003328	antisense lncRNA gene	Chr17:42285484-42289585 (-)
FVB/NJ	MGP_FVBNJ_G0003346	antisense lncRNA gene	Chr17:41849038-41853143 (-)
LP/J	MGP_LPJ_G0003400	antisense lncRNA gene	Chr17:45150157-45154258 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0003334	antisense lncRNA gene	Chr17:47752954-47757055 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0003515	antisense lncRNA gene	Chr17:44075590-44079700 (-)
PWK/PhJ	MGP_PWKPhJ_G0003244	antisense lncRNA gene	Chr17:41539122-41543223 (-)
SPRET/EiJ	MGP_SPRETEiJ_G0003189	antisense lncRNA gene	Chr17:40943934-40945266 (-)
WSB/EiJ	MGP_WSBEiJ_G0003322	antisense lncRNA gene	Chr17:44595462-44599566 (-)

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Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.

Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.

Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.

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Expression Overview

GXD's primary emphasis is on endogenous gene expression during development. Click on grid cells to view annotations.

Blue cells = expressed in wild-type.
Gray triangles = other expression annotations only
(e.g. absence of expression or data from mutants).

early conceptus	embryo ectoderm	embryo endoderm	embryo mesoderm	embryo mesenchyme	extraembryonic component	alimentary system	auditory system	branchial arches	cardiovascular system	connective tissue	endocrine system	exocrine system	hemolymphoid system	integumental system	limbs	liver and biliary system	musculoskeletal system	nervous system	olfactory system	reproductive system	respiratory system	urinary system	visual system

Click cells to view annotations.

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Representative Sequences				Length	Strain/Species	Flank
	genomic	73504	NCBI Gene Model \| MGI Sequence Detail	3170	C57BL/6J	± kb
	transcript	NR_045444	RefSeq \| MGI Sequence Detail	2504	C57BL/6

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Summaries

All 8
Earliest

J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
Latest

J:99680 The FANTOM Consortium and RIKEN Genome Exploration Research Group and Genome Science Group (Genome Network Project Core Group), The Transcriptional Landscape of the Mammalian Genome. Science. 2005;309(5740):1559-1563

TSS for 1700071M16Rik:

(View these features in JBrowse)

Contributing Projects: Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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