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Ccsap Gene Detail
Summary
  • Symbol
    Ccsap
  • Name
    centriole, cilia and spindle associated protein
  • Synonyms
    1700054N08Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:1920670
    NCBI Gene: 73420
  • Alliance
    gene page
  • Transcription Start Sites
    5 TSS
Location &
Maps
more
  • Sequence Map
    Chr8:124567570-124586948 bp, - strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 8, 72.22 cM, cytoband E2
  • Mapping Data
    3 experiments
Strain
Comparison
more
  • SNPs within 2kb
    256 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1920670
 protein coding gene Chr8:124566712-124586948 (-)
129S1/SvImJ MGP_129S1SvImJ_G0034262
 protein coding gene Chr8:127475073-127497086 (-)
A/J MGP_AJ_G0034242
 protein coding gene Chr8:122220959-122239823 (-)
AKR/J MGP_AKRJ_G0034169
 protein coding gene Chr8:125731729-125753362 (-)
BALB/cJ MGP_BALBcJ_G0034235
 protein coding gene Chr8:122407297-122426893 (-)
C3H/HeJ MGP_C3HHeJ_G0033946
 protein coding gene Chr8:126370047-126391079 (-)
C57BL/6NJ MGP_C57BL6NJ_G0034755
 protein coding gene Chr8:131754985-131777898 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0031697
 protein coding gene Chr8:114998869-115018504 (-)
CAST/EiJ MGP_CASTEiJ_G0033274
 protein coding gene Chr8:126481132-126503536 (-)
CBA/J MGP_CBAJ_G0033919
 protein coding gene Chr8:136571149-136592339 (-)
DBA/2J MGP_DBA2J_G0034075
 protein coding gene Chr8:121374951-121395197 (-)
FVB/NJ MGP_FVBNJ_G0034019
 protein coding gene Chr8:120536994-120557328 (-)
LP/J MGP_LPJ_G0034165
 protein coding gene Chr8:127637482-127658715 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0034066
 protein coding gene Chr8:138709591-138730764 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0034774
 protein coding gene Chr8:125962426-125984421 (-)
PWK/PhJ MGP_PWKPhJ_G0032975
 protein coding gene Chr8:121129349-121149726 (-)
SPRET/EiJ MGP_SPRETEiJ_G0032815
 protein coding gene Chr8:124609844-124628439 (-)
WSB/EiJ MGP_WSBEiJ_G0033390
 protein coding gene Chr8:126692700-126713073 (-)



Homology
more
  • Human Ortholog
    CCSAP, centriole, cilia and spindle associated protein
  • Vertebrate Orthologs
    4
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    CCSAP, centriole, cilia and spindle associated protein
  • Synonyms
    C1orf96, CSAP
  • Links
    NCBI Gene ID: 126731
    neXtProt AC: NX_Q6IQ19
    UniProt: Q6IQ19

  • Chr Location
    1q42.13; chr1:229321011-229343294 (-)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    3 phenotypes from 1 allele in 1 genetic background
    7 phenotype references
Phenotype Overview

adipose tissue
behavior/neurological
cardiovascular system
cellular
craniofacial
digestive/alimentary system
embryo
endocrine/exocrine glands
growth/size/body
hearing/vestibular/ear
hematopoietic system
homeostasis/metabolism
integument
immune system
limbs/digits/tail
liver/biliary system
mortality/aging
muscle
nervous system
pigmentation
renal/urinary system
reproductive system
respiratory system
skeleton
taste/olfaction
neoplasm
vision/eye

Click cells to view annotations.
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    38
  • GO References
    4
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    725
  • Tissues
    3
  • cDNA Data
    8
  • Literature Summary
    1
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000031971 Ensembl Gene Model | MGI Sequence Detail 19379 C57BL/6J ±  kb
transcript ENSMUST00000034452 Ensembl | MGI Sequence Detail 2390 Not Applicable  
polypeptide ENSMUSP00000034452 Ensembl | MGI Sequence Detail 252 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    1 Sequence
  • Protein Ontology
    PR:000031246 centriole, cilia and spindle-associated protein
    (term hierarchy)
  • InterPro Domains
    IPR029774 Centriole, cilia and spindle-associated protein
Molecular
Reagents
less
  • All nucleic 8
    cDNA 8

    Microarray probesets 6
Other
Accession IDs
less
MGI:2142638
References
more
  • Summaries
    All 31
    Developmental Gene Expression 1
    Gene Ontology 4
    Phenotypes 7
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
04/16/2024
MGI 6.23 		The Jackson Laboratory