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Fam117b Gene Detail
Summary
  • Symbol
    Fam117b
  • Name
    family with sequence similarity 117, member B
  • Synonyms
    2810425F24Rik, 6330416D14Rik, Als2cr13
  • Feature Type
    protein coding gene
  • IDs
    MGI:1920000
    NCBI Gene: 72750
  • Alliance
    gene page
  • Transcription Start Sites
    6 TSS
Location &
Maps
more
  • Sequence Map
    Chr1:59952165-60024505 bp, + strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 1, 30.44 cM
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    208 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1920000
 protein coding gene Chr1:59952165-60024507 (+)
129S1/SvImJ MGP_129S1SvImJ_G0016071
 protein coding gene Chr1:59937070-60013359 (+)
A/J MGP_AJ_G0016054
 protein coding gene Chr1:57826498-57899523 (+)
AKR/J MGP_AKRJ_G0016010
 protein coding gene Chr1:59454493-59526248 (+)
BALB/cJ MGP_BALBcJ_G0016009
 protein coding gene Chr1:57851959-57927636 (+)
C3H/HeJ MGP_C3HHeJ_G0015841
 protein coding gene Chr1:59699284-59776501 (+)
C57BL/6NJ MGP_C57BL6NJ_G0016462
 protein coding gene Chr1:62281939-62352512 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0014183
 protein coding gene Chr1:54033402-54104022 (+)
CAST/EiJ MGP_CASTEiJ_G0015423
 protein coding gene Chr1:58881842-58960725 (+)
CBA/J MGP_CBAJ_G0015813
 protein coding gene Chr1:64217180-64294690 (+)
DBA/2J MGP_DBA2J_G0015914
 protein coding gene Chr1:57253245-57324057 (+)
FVB/NJ MGP_FVBNJ_G0015916
 protein coding gene Chr1:56553908-56625807 (+)
LP/J MGP_LPJ_G0015986
 protein coding gene Chr1:60821651-60897073 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0015936
 protein coding gene Chr1:67137172-67212927 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0016509
 protein coding gene Chr1:59356861-59430552 (+)
PWK/PhJ MGP_PWKPhJ_G0015210
 protein coding gene Chr1:56597741-56674586 (+)
SPRET/EiJ MGP_SPRETEiJ_G0014990
 protein coding gene Chr1:58897491-58964921 (+)
WSB/EiJ MGP_WSBEiJ_G0015486
 protein coding gene Chr1:59063384-59139244 (+)



Homology
more
  • Human Ortholog
    FAM117B, family with sequence similarity 117 member B
  • Vertebrate Orthologs
    4
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    FAM117B, family with sequence similarity 117 member B
  • Synonyms
    ALS2CR13
  • Links
    NCBI Gene ID: 150864
    neXtProt AC: NX_Q6P1L5
    UniProt: Q6P1L5

  • Chr Location
    2q33.2; chr2:202634969-202769757 (+)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    6 phenotypes from 1 allele in 1 genetic background
    10 phenotype references
Phenotype Overview

adipose tissue
behavior/neurological
cardiovascular system
cellular
craniofacial
digestive/alimentary system
embryo
endocrine/exocrine glands
growth/size/body
hearing/vestibular/ear
hematopoietic system
homeostasis/metabolism
integument
immune system
limbs/digits/tail
liver/biliary system
mortality/aging
muscle
nervous system
pigmentation
renal/urinary system
reproductive system
respiratory system
skeleton
taste/olfaction
neoplasm
vision/eye

Click cells to view annotations.
Gene Ontology
(GO)
Classifications
less
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    708
  • Tissues
    2
  • cDNA Data
    92
  • Literature Summary
    1
  • Comparison Matrix
    Gene Expression + Phenotype
    • Sequences &
    Gene Models
    less
    Representative SequencesLengthStrain/SpeciesFlank
    genomic ENSMUSG00000041040 Ensembl Gene Model | MGI Sequence Detail 72341 C57BL/6J ±  kb
    transcript ENSMUST00000036540 Ensembl | MGI Sequence Detail 5532 Not Applicable  
    polypeptide ENSMUSP00000041671 Ensembl | MGI Sequence Detail 584 Not Applicable  
    For the selected sequence
    Protein
    Information
    less
    Molecular
    Reagents
    less
    • All nucleic 92
      cDNA 92

      Microarray probesets 5
    Other
    Accession IDs
    less
    MGI:1917984
    References
    more
    • Summaries
      All 32
      Developmental Gene Expression 1
      Phenotypes 10
    • Earliest
      J:134667 Roderick TH, et al., Two radiation-induced chromosomal inversions in mice (Mus musculus). Proc Natl Acad Sci U S A. 1970 Oct;67(2):961-7
    • Latest
      J:313619 Bedogni F, et al., Cell-Type-Specific Gene Expression in Developing Mouse Neocortex: Intermediate Progenitors Implicated in Axon Development. Front Mol Neurosci. 2021;14:686034
    Contributing Projects:
    Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
    Citing These Resources
    Funding Information
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    Send questions and comments to User Support.     		last database update
    04/09/2024
    MGI 6.23     		The Jackson Laboratory