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Zc2hc1c Gene Detail
Summary
  • Symbol
    Zc2hc1c
  • Name
    zinc finger, C2HC-type containing 1C
  • Synonyms
    2810002I04Rik, Fam164c
  • Feature Type
    protein coding gene
  • IDs
    MGI:1919600
    NCBI Gene: 72350
  • Alliance
    gene page
  • Transcription Start Sites
    3 TSS
Location &
Maps
more
  • Sequence Map
    Chr12:85321060-85346132 bp, + strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 12, 39.63 cM
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    81 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1919600
 protein coding gene Chr12:85321020-85346132 (+)
129S1/SvImJ MGP_129S1SvImJ_G0019958
 protein coding gene Chr12:86058732-86069499 (+)
A/J MGP_AJ_G0019915
 protein coding gene Chr12:82791564-82802331 (+)
AKR/J MGP_AKRJ_G0019891
 protein coding gene Chr12:85037661-85048429 (+)
BALB/cJ MGP_BALBcJ_G0019895
 protein coding gene Chr12:83135400-83146167 (+)
C3H/HeJ MGP_C3HHeJ_G0019701
 protein coding gene Chr12:85508396-85519163 (+)
C57BL/6NJ MGP_C57BL6NJ_G0020346
 protein coding gene Chr12:88545267-88556034 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0017964
 protein coding gene Chr12:79677053-79689277 (+)
CAST/EiJ MGP_CASTEiJ_G0019250
 protein coding gene Chr12:80479616-80490526 (+)
CBA/J MGP_CBAJ_G0019672
 protein coding gene Chr12:91920808-91931575 (+)
DBA/2J MGP_DBA2J_G0019787
 protein coding gene Chr12:82307983-82318750 (+)
FVB/NJ MGP_FVBNJ_G0019773
 protein coding gene Chr12:81270988-81281755 (+)
LP/J MGP_LPJ_G0019859
 protein coding gene Chr12:85934106-85944873 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0019812
 protein coding gene Chr12:94799095-94809862 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0020380
 protein coding gene Chr12:84640532-84651299 (+)
PWK/PhJ MGP_PWKPhJ_G0019014
 protein coding gene Chr12:76810456-76821153 (+)
SPRET/EiJ MGP_SPRETEiJ_G0018809
 protein coding gene Chr12:79118751-79130055 (+)
WSB/EiJ MGP_WSBEiJ_G0019302
 protein coding gene Chr12:85366918-85377696 (+)



Homology
more
  • Human Ortholog
    ZC2HC1C, zinc finger C2HC-type containing 1C
  • Vertebrate Orthologs
    3
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    ZC2HC1C, zinc finger C2HC-type containing 1C
  • Synonyms
    C14orf140, FAM164C
  • Links
    NCBI Gene ID: 79696
    neXtProt AC: NX_Q53FD0
    UniProt: Q53FD0

  • Chr Location
    14q24.3; chr14:75064109-75119502 (+)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    12 phenotypes from 1 allele in 1 genetic background
    7 phenotype references
Phenotype Overview

adipose tissue
behavior/neurological
cardiovascular system
cellular
craniofacial
digestive/alimentary system
embryo
endocrine/exocrine glands
growth/size/body
hearing/vestibular/ear
hematopoietic system
homeostasis/metabolism
integument
immune system
limbs/digits/tail
liver/biliary system
mortality/aging
muscle
nervous system
pigmentation
renal/urinary system
reproductive system
respiratory system
skeleton
taste/olfaction
neoplasm
vision/eye

Click cells to view annotations.
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    1
  • GO References
    1
Molecular Function

Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    707
  • Tissues
    1
  • cDNA Data
    15
  • Literature Summary
    1
  • Comparison Matrix
    Gene Expression + Phenotype
    • Sequences &
    Gene Models
    less
    Representative SequencesLengthStrain/SpeciesFlank
    genomic ENSMUSG00000045064 Ensembl Gene Model | MGI Sequence Detail 25073 C57BL/6J ±  kb
    transcript ENSMUST00000059341 Ensembl | MGI Sequence Detail 4482 Not Applicable  
    polypeptide ENSMUSP00000051664 Ensembl | MGI Sequence Detail 527 Not Applicable  
    For the selected sequence
    Protein
    Information
    less
    Molecular
    Reagents
    less
    • All nucleic 15
      cDNA 15

      Microarray probesets 7
    Other
    Accession IDs
    less
    MGI:2144980
    References
    more
    • Summaries
      All 27
      Developmental Gene Expression 1
      Gene Ontology 1
      Phenotypes 7
    • Earliest
      J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
    • Latest
      J:345621 Adams DJ, et al., Genetic determinants of micronucleus formation in vivo. Nature. 2024 Mar;627(8002):130-136
    Contributing Projects:
    Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
    Citing These Resources
    Funding Information
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    Send questions and comments to User Support.     		last database update
    04/23/2024
    MGI 6.23     		The Jackson Laboratory