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4933427E13Rik Gene Detail
Summary
  • Symbol
    4933427E13Rik
  • Name
    RIKEN cDNA 4933427E13 gene
  • Feature Type
    lncRNA gene
  • IDs
    MGI:1918484
    NCBI Gene: 71234
  • Alliance
    gene page
Location &
Maps
more
  • Sequence Map
    Chr11:25276107-25317137 bp, + strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 11, 15.32 cM, cytoband A3.3
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    275 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1918484
 lncRNA gene Chr11:25182626-25317137 (+)
129S1/SvImJ MGP_129S1SvImJ_G0005193
 lincRNA gene Chr11:23047158-23195788 (+)
A/J MGP_AJ_G0005178
 lincRNA gene Chr11:22146673-22290609 (+)
AKR/J MGP_AKRJ_G0005156
 lincRNA gene Chr11:22946749-23082857 (+)
BALB/cJ MGP_BALBcJ_G0005158
 lincRNA gene Chr11:22296039-22439426 (+)
C3H/HeJ MGP_C3HHeJ_G0005107
 lincRNA gene Chr11:22828398-22970601 (+)
C57BL/6NJ MGP_C57BL6NJ_G0005310
 lincRNA gene Chr11:23969079-24112914 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0004708
 lincRNA gene Chr11:21002900-21137086 (+)
CAST/EiJ MGP_CASTEiJ_G0005054
 lincRNA gene Chr11:22857554-23016766 (+)
CBA/J MGP_CBAJ_G0005097
 lincRNA gene Chr11:24992907-25143240 (+)
DBA/2J MGP_DBA2J_G0005114
 lincRNA gene Chr11:22066868-22205145 (+)
FVB/NJ MGP_FVBNJ_G0005139
 lincRNA gene Chr11:21853059-21988273 (+)
LP/J MGP_LPJ_G0005195
 lincRNA gene Chr11:23149160-23291061 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0005122
 lincRNA gene Chr11:25564607-25716002 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0005313
 lincRNA gene Chr11:23038969-23175234 (+)
PWK/PhJ MGP_PWKPhJ_G0005005
 lincRNA gene Chr11:22150186-22292332 (+)
SPRET/EiJ MGP_SPRETEiJ_G0004928
 lincRNA gene Chr11:22771364-22911843 (+)
WSB/EiJ MGP_WSBEiJ_G0005102
 lincRNA gene Chr11:22678315-22827310 (+)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    3 phenotype references
Gene Ontology
(GO)
Classifications
less
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    3
Sequences &
Gene Models
less
  • All Sequences
    26
  • RefSeq
    1
  • UniProt
    1
Representative SequencesLengthStrain/SpeciesFlank
genomic 71234 NCBI Gene Model | MGI Sequence Detail 41031 C57BL/6J ±  kb
transcript NR_045853 RefSeq | MGI Sequence Detail 1493 C57BL/6  
polypeptide Q9D3Y3 UniProt | EBI | MGI Sequence Detail 126 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    1 Sequence
Molecular
Reagents
less
  • All nucleic 3
    cDNA 3

    Microarray probesets 2
References
more
  • Summaries
    All 16
    Phenotypes 3
  • Earliest
    J:137335 Roderick TH, Chromosomal inversions in studies of mammalian mutagenesis. Genetics. 1979 May;92(1 Pt 1 Suppl):s121-6
  • Latest
    J:80000 The FANTOM Consortium and The RIKEN Genome Exploration Research Group Phase I & II Team, Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Nature. 2002;420:563-573
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
04/09/2024
MGI 6.23 		The Jackson Laboratory