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Lyrm2 Gene Detail
Summary
  • Symbol
    Lyrm2
  • Name
    LYR motif containing 2
  • Synonyms
    2610208E05Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:1917573
    NCBI Gene: 108755
  • Alliance
    gene page
  • Transcription Start Sites
    1 TSS
Location &
Maps
more
  • Sequence Map
    Chr4:32800253-32801559 bp, + strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 4, 14.42 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    10 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1917573
 protein coding gene Chr4:32800253-32802268 (+)
129S1/SvImJ MGP_129S1SvImJ_G0028113
 protein coding gene Chr4:30269081-30271672 (+)
A/J MGP_AJ_G0028071
 protein coding gene Chr4:29196756-29198063 (+)
AKR/J MGP_AKRJ_G0028035
 protein coding gene Chr4:29951956-29953298 (+)
BALB/cJ MGP_BALBcJ_G0028082
 protein coding gene Chr4:29458332-29459639 (+)
C3H/HeJ MGP_C3HHeJ_G0027812
 protein coding gene Chr4:30238399-30239702 (+)
C57BL/6NJ MGP_C57BL6NJ_G0028524
 protein coding gene Chr4:31459505-31460811 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0025866
 protein coding gene Chr4:27256133-27257510 (+)
CAST/EiJ MGP_CASTEiJ_G0027266
 protein coding gene Chr4:30017937-30024591 (+)
CBA/J MGP_CBAJ_G0027784
 protein coding gene Chr4:32454246-32455549 (+)
DBA/2J MGP_DBA2J_G0027928
 protein coding gene Chr4:29203801-29205104 (+)
FVB/NJ MGP_FVBNJ_G0027893
 protein coding gene Chr4:28623119-28624422 (+)
LP/J MGP_LPJ_G0028036
 protein coding gene Chr4:30363362-30364669 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0027926
 protein coding gene Chr4:35056093-35057396 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0028583
 protein coding gene Chr4:29951471-29953480 (+)
PWK/PhJ MGP_PWKPhJ_G0026986
 protein coding gene Chr4:29179056-29180474 (+)
SPRET/EiJ MGP_SPRETEiJ_G0026814
 protein coding gene Chr4:29836605-29837904 (+)
WSB/EiJ MGP_WSBEiJ_G0027343
 protein coding gene Chr4:29965072-29966395 (+)



Homology
more
  • Human Ortholog
    LYRM2, LYR motif containing 2
  • Vertebrate Orthologs
    3
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    LYRM2, LYR motif containing 2
  • Synonyms
    DJ122O8.2
  • Links
    NCBI Gene ID: 57226
    neXtProt AC: NX_Q9NU23
    UniProt: Q9NU23

  • Chr Location
    6q15; chr6:89568144-89638749 (-)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    4 phenotype references
  • All Mutations and Alleles
    4
  • Chemically and radiation induced
    1
  • Endonuclease-mediated
    2
  • Gene trapped
    1
  • Genomic Mutations
    1 involving Lyrm2
  • Find Mice (IMSR)
    3 strains or lines available
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    4
  • GO References
    4
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    43
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000045854 Ensembl Gene Model | MGI Sequence Detail 1307 C57BL/6J ±  kb
transcript ENSMUST00000062802 Ensembl | MGI Sequence Detail 465 Not Applicable  
polypeptide ENSMUSP00000061451 Ensembl | MGI Sequence Detail 88 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 44
    cDNA 44

    Microarray probesets 4
References
more
  • Summaries
    All 25
    Gene Ontology 4
    Phenotypes 4
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:151002 Pagliarini DJ, et al., A mitochondrial protein compendium elucidates complex I disease biology. Cell. 2008 Jul 11;134(1):112-23
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
04/09/2024
MGI 6.23 		The Jackson Laboratory