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1500009L16Rik Gene Detail
Summary
  • Symbol
    1500009L16Rik
  • Name
    RIKEN cDNA 1500009L16 gene
  • Synonyms
    2700050C19Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:1917034
    NCBI Gene: 69784
  • Alliance
    gene page
  • Transcription Start Sites
    2 TSS
Location &
Maps
more
  • Sequence Map
    Chr10:83558729-83598626 bp, + strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 10, 41.30 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    228 from dbSNP Build 142
  • Strain Annotations
    17
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1917034
 protein coding gene Chr10:83558560-83598626 (+)
129S1/SvImJ MGP_129S1SvImJ_G0017589
 protein coding gene Chr10:84543196-84592006 (+)
A/J MGP_AJ_G0017569
 protein coding gene Chr10:81684002-81725854 (+)
AKR/J MGP_AKRJ_G0017528
 protein coding gene Chr10:83948881-83992563 (+)
BALB/cJ MGP_BALBcJ_G0017532
 protein coding gene Chr10:81938605-81980392 (+)
C3H/HeJ MGP_C3HHeJ_G0017354
 protein coding gene Chr10:84046298-84091415 (+)
C57BL/6NJ MGP_C57BL6NJ_G0017989
 protein coding gene Chr10:87441281-87481777 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0015673
 protein coding gene Chr10:77375059-77418048 (+)
CAST/EiJ MGP_CASTEiJ_G0016921
 protein coding gene Chr10:83912635-83952404 (+)
CBA/J MGP_CBAJ_G0017324
 protein coding gene Chr10:91093125-91139465 (+)
DBA/2J MGP_DBA2J_G0017430
 protein coding gene Chr10:80839601-80880665 (+)
FVB/NJ MGP_FVBNJ_G0017424
 protein coding gene Chr10:80078886-80125455 (+)
LP/J MGP_LPJ_G0017502
 protein coding gene Chr10:85192578-85242942 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0017452
 protein coding gene Chr10:92735862-92782353 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0018026
 protein coding gene Chr10:83894296-83935976 (+)
PWK/PhJ MGP_PWKPhJ_G0016702
 protein coding gene Chr10:80705643-80746914 (+)
SPRET/EiJ no annotation
WSB/EiJ MGP_WSBEiJ_G0016980
 protein coding gene Chr10:83890753-83932946 (+)



Homology
more
  • Human Ortholog
    C12orf75, chromosome 12 open reading frame 75
  • Vertebrate Orthologs
    3
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    C12orf75, chromosome 12 open reading frame 75
  • Synonyms
    AGD3, OCC1, OCC-1
  • Links
    NCBI Gene ID: 387882
    neXtProt AC: NX_Q8TAD7
    UniProt: Q8TAD7

  • Chr Location
    12q23.3; chr12:105235290-105396097 (+)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    5 phenotypes from 1 allele in 1 genetic background
    13 phenotype references
Phenotype Overview

adipose tissue
behavior/neurological
cardiovascular system
cellular
craniofacial
digestive/alimentary system
embryo
endocrine/exocrine glands
growth/size/body
hearing/vestibular/ear
hematopoietic system
homeostasis/metabolism
integument
immune system
limbs/digits/tail
liver/biliary system
mortality/aging
muscle
nervous system
pigmentation
renal/urinary system
reproductive system
respiratory system
skeleton
taste/olfaction
neoplasm
vision/eye

Click cells to view annotations.
Gene Ontology
(GO)
Classifications
less
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    17
  • Comparison Matrix
    Gene Expression + Phenotype
    • Sequences &
    Gene Models
    less
    Representative SequencesLengthStrain/SpeciesFlank
    genomic ENSMUSG00000087651 Ensembl Gene Model | MGI Sequence Detail 39898 C57BL/6J ±  kb
    transcript ENSMUST00000150459 Ensembl | MGI Sequence Detail 1194 Not Applicable  
    polypeptide ENSMUSP00000129542 Ensembl | MGI Sequence Detail 63 Not Applicable  
    For the selected sequence
    Protein
    Information
    less
    Molecular
    Reagents
    less
    • All nucleic 17
      cDNA 17

      Microarray probesets 2
    Other
    Accession IDs
    less
    MGI:1917482
    References
    more
    • Summaries
      All 28
      Phenotypes 13
    • Earliest
      J:137335 Roderick TH, Chromosomal inversions in studies of mammalian mutagenesis. Genetics. 1979 May;92(1 Pt 1 Suppl):s121-6
    • Latest
      J:142754 Hansen GM, et al., Large-scale gene trapping in C57BL/6N mouse embryonic stem cells. Genome Res. 2008 Oct;18(10):1670-9
    Contributing Projects:
    Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
    Citing These Resources
    Funding Information
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    Send questions and comments to User Support.     		last database update
    04/16/2024
    MGI 6.23     		The Jackson Laboratory