Efcab15 MGI Mouse Gene Detail - MGI:1916691 - EF-hand calcium binding domain 15

Sequence Map

Chr11:103089770-103099374 bp, - strand
From Ensembl annotation of GRCm39
View this region in JBrowse
Genome Browsers

Ensembl | UCSC | NCBI

For selected strains:

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_1916691	protein coding gene	Chr11:103089769-103099374 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0019259	protein coding gene	Chr11:106256506-106265920 (-)
A/J	MGP_AJ_G0019227	protein coding gene	Chr11:101747711-101756920 (-)
AKR/J	MGP_AKRJ_G0019196	protein coding gene	Chr11:104881370-104890924 (-)
BALB/cJ	MGP_BALBcJ_G0019201	protein coding gene	Chr11:102214469-102224045 (-)
C3H/HeJ	MGP_C3HHeJ_G0019010	protein coding gene	Chr11:105109202-105121096 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0019650	protein coding gene	Chr11:109560422-109570484 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0017276	protein coding gene	Chr11:99156115-99164682 (-)
CAST/EiJ	MGP_CASTEiJ_G0018564	protein coding gene	Chr11:106128890-106139563 (-)
CBA/J	MGP_CBAJ_G0018979	protein coding gene	Chr11:114114516-114126581 (-)
DBA/2J	MGP_DBA2J_G0019091	protein coding gene	Chr11:101253915-101263909 (-)
FVB/NJ	MGP_FVBNJ_G0019081	protein coding gene	Chr11:100798166-100807711 (-)
LP/J	MGP_LPJ_G0019160	protein coding gene	Chr11:106766473-106775734 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0019112	protein coding gene	Chr11:113492640-113506709 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0019688	protein coding gene	Chr11:105265960-105276589 (-)
PWK/PhJ	MGP_PWKPhJ_G0018327	protein coding gene	Chr11:102326552-102336419 (-)
SPRET/EiJ	MGP_SPRETEiJ_G0018119	protein coding gene	Chr11:105016657-105026205 (-)
WSB/EiJ	MGP_WSBEiJ_G0018613	protein coding gene	Chr11:105263998-105275209 (-)

Vertebrate Orthology Source

Alliance of Genome Resources

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Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.

Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.

Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.

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Expression Overview

GXD's primary emphasis is on endogenous gene expression during development. Click on grid cells to view annotations.

Blue cells = expressed in wild-type.
Gray triangles = other expression annotations only
(e.g. absence of expression or data from mutants).

early conceptus	embryo ectoderm	embryo endoderm	embryo mesoderm	embryo mesenchyme	extraembryonic component	alimentary system	auditory system	branchial arches	cardiovascular system	connective tissue	endocrine system	exocrine system	hemolymphoid system	integumental system	limbs	liver and biliary system	musculoskeletal system	nervous system	olfactory system	reproductive system	respiratory system	urinary system	visual system

Click cells to view annotations.

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			Length	Strain/Species	Flank
genomic	ENSMUSG00000020940	Ensembl Gene Model \| MGI Sequence Detail	9605	C57BL/6J	± kb
transcript	ENSMUST00000021323	Ensembl \| MGI Sequence Detail	1199	Not Applicable
polypeptide	ENSMUSP00000021323	Ensembl \| MGI Sequence Detail	382	Not Applicable

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Summaries

All 24

Phenotypes 8
Earliest

J:56548 Zheng B, et al., Engineering a mouse balancer chromosome. Nat Genet. 1999 Aug;22(4):375-8
Latest

J:174216 Terzian T, et al., Rpl27a mutation in the sooty foot ataxia mouse phenocopies high p53 mouse models. J Pathol. 2011 Aug;224(4):540-52

TSS for Efcab15:

(View these features in JBrowse)

Contributing Projects: Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources Funding Information Warranty Disclaimer, Privacy Notice, Licensing, & Copyright Send questions and comments to User Support.	last database update 04/16/2024 MGI 6.23