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1110002J07Rik Gene Detail
Summary
  • Symbol
    1110002J07Rik
  • Name
    RIKEN cDNA 1110002J07 gene
  • Feature Type
    lncRNA gene
  • IDs
    MGI:1915738
    NCBI Gene: 68488
  • Alliance
    gene page
  • Transcription Start Sites
    1 TSS
Location &
Maps
more
  • Sequence Map
    Chr10:66748268-66756037 bp, - strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 10, 34.81 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    116 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1915738
 lncRNA gene Chr10:66747969-66756163 (-)
129S1/SvImJ MGP_129S1SvImJ_G0005127
 lincRNA gene Chr10:66625368-66633124 (-)
A/J MGP_AJ_G0005110
 lincRNA gene Chr10:64418486-64426262 (-)
AKR/J MGP_AKRJ_G0005088
 lincRNA gene Chr10:66167596-66175361 (-)
BALB/cJ MGP_BALBcJ_G0005091
 lincRNA gene Chr10:64609508-64618147 (-)
C3H/HeJ MGP_C3HHeJ_G0005040
 lincRNA gene Chr10:66154928-66163190 (-)
C57BL/6NJ MGP_C57BL6NJ_G0005241
 lincRNA gene Chr10:69064704-69072471 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0004647
 lincRNA gene Chr10:61115781-61123394 (-)
CAST/EiJ MGP_CASTEiJ_G0004987
 lincRNA gene Chr10:66187775-66197150 (-)
CBA/J MGP_CBAJ_G0005030
 lincRNA gene Chr10:71666642-71674415 (-)
DBA/2J MGP_DBA2J_G0005049
 lincRNA gene Chr10:63774986-63782753 (-)
FVB/NJ MGP_FVBNJ_G0005071
 lincRNA gene Chr10:62969527-62978411 (-)
LP/J MGP_LPJ_G0005128
 lincRNA gene Chr10:67040896-67050274 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0005054
 lincRNA gene Chr10:73923552-73932494 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0005248
 lincRNA gene Chr10:66063093-66072076 (-)
PWK/PhJ MGP_PWKPhJ_G0004938
 lincRNA gene Chr10:63582484-63591080 (-)
SPRET/EiJ MGP_SPRETEiJ_G0004863
 lincRNA gene Chr10:65392472-65400118 (-)
WSB/EiJ MGP_WSBEiJ_G0005034
 lincRNA gene Chr10:65984386-65993460 (-)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    10 phenotype references
  • All Mutations and Alleles
    3
  • Chemically induced (other)
    1
  • Gene trapped
    1
  • Radiation induced
    1
  • Genomic Mutations
    2 involving 1110002J07Rik
  • Find Mice (IMSR)
    1 strains or lines available
Gene Ontology
(GO)
Classifications
less
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    3
Sequences &
Gene Models
less
  • All Sequences
    28
  • RefSeq
    2
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000097134 Ensembl Gene Model | MGI Sequence Detail 7770 C57BL/6J ±  kb
transcript ENSMUST00000181710 Ensembl | MGI Sequence Detail 2229 Not Applicable  
For the selected sequence
Molecular
Reagents
less
  • All nucleic 3
    cDNA 3
References
more
  • Summaries
    All 18
    Phenotypes 10
  • Earliest
    J:109968 Roderick TH, et al., Nineteen paracentric chromosomal inversions in mice. Genetics. 1974 Jan;76(1):109-17
  • Latest
    J:198500 Nakahara M, et al., Gene-trap mutagenesis using Mol/MSM-1 embryonic stem cells from MSM/Ms mice. Mamm Genome. 2013 Jun;24(5-6):228-39
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
04/16/2024
MGI 6.23 		The Jackson Laboratory