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2310057M21Rik Gene Detail
Summary
  • Symbol
    2310057M21Rik
  • Name
    RIKEN cDNA 2310057M21 gene
  • Synonyms
    3110040E10Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:1915527
    NCBI Gene: 68277
  • Alliance
    gene page
  • Transcription Start Sites
    3 TSS
Location &
Maps
more
  • Sequence Map
    Chr7:130943340-130964570 bp, - strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 7, 73.88 cM
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    168 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1915527
 protein coding gene Chr7:130939949-130964570 (-)
129S1/SvImJ MGP_129S1SvImJ_G0033102
 protein coding gene Chr7:135968551-135990936 (-)
A/J MGP_AJ_G0033084
 protein coding gene Chr7:132256475-132276421 (-)
AKR/J MGP_AKRJ_G0033016
 protein coding gene Chr7:135766377-135786789 (-)
BALB/cJ MGP_BALBcJ_G0033085
 protein coding gene Chr7:131946900-131966733 (-)
C3H/HeJ MGP_C3HHeJ_G0032799
 protein coding gene Chr7:135617457-135637402 (-)
C57BL/6NJ MGP_C57BL6NJ_G0033596
 protein coding gene Chr7:141152870-141182426 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0030567
 protein coding gene Chr7:133532762-133552070 (-)
CAST/EiJ MGP_CASTEiJ_G0032129
 protein coding gene Chr7:127470868-127490732 (-)
CBA/J MGP_CBAJ_G0032772
 protein coding gene Chr7:146058367-146078225 (-)
DBA/2J MGP_DBA2J_G0032924
 protein coding gene Chr7:130241242-130261440 (-)
FVB/NJ MGP_FVBNJ_G0032877
 protein coding gene Chr7:130107195-130127566 (-)
LP/J MGP_LPJ_G0033018
 protein coding gene Chr7:137462654-137482772 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0032909
 protein coding gene Chr7:146970657-146995170 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0033616
 protein coding gene Chr7:134761027-134781547 (-)
PWK/PhJ MGP_PWKPhJ_G0031835
 protein coding gene Chr7:123275303-123297308 (-)
SPRET/EiJ MGP_SPRETEiJ_G0031681
 protein coding gene Chr7:121531502-121551931 (-)
WSB/EiJ MGP_WSBEiJ_G0032240
 protein coding gene Chr7:135660517-135682001 (-)



Homology
more
  • Human Ortholog
    C10orf88, chromosome 10 open reading frame 88
  • Vertebrate Orthologs
    4
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    C10orf88, chromosome 10 open reading frame 88
  • Synonyms
    PAAT
  • Links
    NCBI Gene ID: 80007
    neXtProt AC: NX_Q9H8K7
    UniProt: Q9H8K7

  • Chr Location
    10q26.13; chr10:122930901-122954311 (-)  GRCh38
  • Human Ortholog
    C10orf88B, C10orf88B (pseudogene)
  • Links
    NCBI Gene ID: 399815
    UniProt: Q499Y3

  • Chr Location
    10q26.13; chr10:122879633-122898714 (+)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    3 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    7
  • GO References
    3
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    869
  • Tissues
    22
  • cDNA Data
    31
  • Literature Summary
    1
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 68277 NCBI Gene Model | MGI Sequence Detail 21231 C57BL/6J ±  kb
transcript NR_152380 RefSeq | MGI Sequence Detail 5308 C57BL/6  
polypeptide Q9D2Q3 UniProt | EBI | MGI Sequence Detail 444 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 33
    cDNA 33

    Microarray probesets 3
Other
Accession IDs
less
MGI:1920430, MGI:2141953
References
more
  • Summaries
    All 28
    Developmental Gene Expression 1
    Gene Ontology 3
    Phenotypes 3
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:326541 Cyagen Biosciences Inc., Cyagen Biosciences Website. 2022;
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
04/16/2024
MGI 6.23 		The Jackson Laboratory