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Arl9 Gene Detail
Summary
  • Symbol
    Arl9
  • Name
    ADP-ribosylation factor-like 9
Location &
Maps
more
  • Sequence Map
    Chr5:77151902-77158453 bp, + strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 5, 41.45 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    186 from dbSNP Build 142
  • Strain Annotations
    14
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1915496
 protein coding gene Chr5:77146054-77158806 (+)
129S1/SvImJ ENSMUSG00200000706
 protein coding gene Chr5:72842287-72848841 (+)
A/J ENSMUSG00195010257
 protein coding gene Chr5:72148941-72155487 (+)
AKR/J ENSMUSG00220014854
 protein coding gene Chr5:72260733-72267263 (+)
BALB/cJ ENSMUSG00180000044
 protein coding gene Chr5:71914092-71920648 (+)
C3H/HeJ ENSMUSG00175004148
 protein coding gene Chr5:73950029-73956559 (+)
C57BL/6NJ ENSMUSG00215000434
 protein coding gene Chr5:72728650-72735199 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0027324
 protein coding gene Chr5:69897804-69903424 (+)
CAST/EiJ no annotation
CBA/J ENSMUSG00210000431
 protein coding gene Chr5:72887973-72894505 (+)
DBA/2J ENSMUSG00185015804
 protein coding gene Chr5:74717914-74724447 (+)
FVB/NJ ENSMUSG00205021495
 protein coding gene Chr5:71676249-71682773 (+)
JF1/MsJ no annotation
LP/J ENSMUSG00230020029
 protein coding gene Chr5:79416243-79422794 (+)
NOD/ShiLtJ ENSMUSG00190007639
 protein coding gene Chr5:71839312-71845856 (+)
NZO/HlLtJ ENSMUSG00225033973
 protein coding gene Chr5:84463236-84469787 (+)
PWK/PhJ no annotation
SPRET/EiJ no annotation
WSB/EiJ no annotation



Homology
more
  • Human Ortholog
    ARL9, ARF like GTPase 9
  • Vertebrate Orthologs
    3
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    ARL9, ARF like GTPase 9
  • Links
    NCBI Gene ID: 132946
    UniProt: Q6T311

  • Chr Location
    4q12; chr4:56505209-56524959 (+)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    9 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    2
  • GO References
    1
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    601
  • Tissues
    4
  • cDNA Data
    3
  • Literature Summary
    1
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000063820 Ensembl Gene Model | MGI Sequence Detail 6552 C57BL/6J ±  kb
transcript ENSMUST00000134197 Ensembl | MGI Sequence Detail 534 Not Applicable  
polypeptide ENSMUSP00000122846 Ensembl | MGI Sequence Detail 171 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    3 Sequences
  • InterPro Domains
    IPR027417 P-loop containing nucleoside triphosphate hydrolase
    IPR053254 Small GTPase Arf-like protein
    IPR006689 Small GTPase superfamily, ARF/SAR type
    IPR005225 Small GTP-binding domain
Molecular
Reagents
less
  • All nucleic 3
    cDNA 3

    Microarray probesets 1
References
more
  • Summaries
    All 25
    Developmental Gene Expression 1
    Gene Ontology 1
    Phenotypes 9
  • Earliest
    J:109968 Roderick TH, et al., Nineteen paracentric chromosomal inversions in mice. Genetics. 1974 Jan;76(1):109-17
  • Latest
    J:345621 Adams DJ, et al., Genetic determinants of micronucleus formation in vivo. Nature. 2024 Mar;627(8002):130-136
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
09/08/2026
MGI 6.24 		The Jackson Laboratory