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2700062C07Rik Gene Detail
Summary
  • Symbol
    2700062C07Rik
  • Name
    RIKEN cDNA 2700062C07 gene
  • Feature Type
    protein coding gene
  • IDs
    MGI:1915296
    NCBI Gene: 68046
  • Alliance
    gene page
  • Transcription Start Sites
    3 TSS
Location &
Maps
more
  • Sequence Map
    Chr18:24603928-24610824 bp, + strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 18, 13.18 cM
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    23 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1915296
 protein coding gene Chr18:24603907-24610855 (+)
129S1/SvImJ MGP_129S1SvImJ_G0024200
 protein coding gene Chr18:22224722-22233538 (+)
A/J MGP_AJ_G0024165
 protein coding gene Chr18:21612576-21619468 (+)
AKR/J MGP_AKRJ_G0024134
 protein coding gene Chr18:22264884-22271777 (+)
BALB/cJ MGP_BALBcJ_G0024165
 protein coding gene Chr18:21673298-21680198 (+)
C3H/HeJ MGP_C3HHeJ_G0023933
 protein coding gene Chr18:22198239-22205136 (+)
C57BL/6NJ MGP_C57BL6NJ_G0024607
 protein coding gene Chr18:23163731-23170622 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0022049
 protein coding gene Chr18:21472821-21479536 (+)
CAST/EiJ MGP_CASTEiJ_G0023407
 protein coding gene Chr18:21999546-22007328 (+)
CBA/J MGP_CBAJ_G0023901
 protein coding gene Chr18:23791838-23798730 (+)
DBA/2J MGP_DBA2J_G0024033
 protein coding gene Chr18:21274308-21281205 (+)
FVB/NJ MGP_FVBNJ_G0023999
 protein coding gene Chr18:21031114-21038043 (+)
LP/J MGP_LPJ_G0024114
 protein coding gene Chr18:22388272-22395166 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0024027
 protein coding gene Chr18:24780155-24787052 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0024655
 protein coding gene Chr18:22028307-22035199 (+)
PWK/PhJ MGP_PWKPhJ_G0023151
 protein coding gene Chr18:21424961-21432443 (+)
SPRET/EiJ MGP_SPRETEiJ_G0022960
 protein coding gene Chr18:22266874-22273781 (+)
WSB/EiJ MGP_WSBEiJ_G0023471
 protein coding gene Chr18:21914472-21921355 (+)



Homology
more
  • Human Ortholog
    C18orf21, chromosome 18 open reading frame 21
  • Vertebrate Orthologs
    3
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    C18orf21, chromosome 18 open reading frame 21
  • Synonyms
    HsT3108, PNAS-124, PNAS-131, XTP13
  • Links
    NCBI Gene ID: 83608
    neXtProt AC: NX_Q32NC0
    UniProt: Q32NC0

  • Chr Location
    18q12.2; chr18:35972625-35979286 (+)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    3 phenotype references
Gene Ontology
(GO)
Classifications
less
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    43
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 68046 NCBI Gene Model | MGI Sequence Detail 6897 C57BL/6J ±  kb
transcript NM_026529 RefSeq | MGI Sequence Detail 1032 C57BL/6  
polypeptide Q5XFZ0 UniProt | EBI | MGI Sequence Detail 217 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 43
    cDNA 43

    Microarray probesets 3
Other
Accession IDs
less
MGI:2147201, MGI:2147416
References
more
  • Summaries
    All 25
    Phenotypes 3
  • Earliest
    J:60984 Ko MS, et al., Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse development. Development. 2000 Apr;127(8):1737-49
  • Latest
    J:162220 Magdaleno S, et al., BGEM: an in situ hybridization database of gene expression in the embryonic and adult mouse nervous system. PLoS Biol. 2006 Apr;4(4):e86
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
04/09/2024
MGI 6.23 		The Jackson Laboratory